{"id":"W2114809100","doi":"10.1371/journal.pone.0018465","title":"R5-SHIV Induces Multiple Defects in T Cell Function during Early Infection of Rhesus Macaques Including Accumulation of T Reg Cells in Lymph Nodes","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Yerkes National Primate Research Center, Emory University; National Institutes of Health","keywords":"Immunology; Biology; CD8; T cell; Immune system; Lymph node; Cytotoxic T cell; Lymph; Antigen; Medicine; In vitro; Pathology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001221473,0.0003757284,0.0002941228,0.0002221874,0.0001872463,0.0002176772,0.0001842431,0.0003252925,0.00158035],"category_scores_gemma":[0.0001662912,0.0001544628,0.0002655334,0.00006476577,0.0002498897,0.0001432578,0.0002064256,0.0006953517,0.0004061098],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003254631,"about_ca_system_score_gemma":0.0001581871,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001440295,"about_ca_topic_score_gemma":0.001822408,"domain_scores_codex":[0.9997879,0.0000265162,0.00001286473,0.00005335721,0.00003123758,0.00008817526],"domain_scores_gemma":[0.9998248,0.00003463216,0.00003646318,0.00002769099,0.00001872858,0.00005767357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003361434,0.00008240849,0.0007363321,0.00004288748,0.000006380864,0.0001590179,0.00008928388,0.00002375876,0.9975358,0.0000338365,0.00005775859,0.0008962803],"study_design_scores_gemma":[0.00007542038,0.006479552,0.07572362,0.00004371145,0.00006294785,0.001824291,0.0005012469,0.001062194,0.9098113,0.0001326836,0.004260122,0.00002296792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984924,0.000460063,0.0002324462,0.0000394482,0.00001411037,0.00002139964,0.0001754897,0.00004233805,0.0005223386],"genre_scores_gemma":[0.997025,0.0001888442,0.0003211843,0.00007746153,0.000008344801,0.00005498296,0.0003242567,0.00001819211,0.001981728],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00158035,"threshold_uncertainty_score":0.005286813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1315241666643921,"score_gpt":0.2764415441321385,"score_spread":0.1449173774677464,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}