{"id":"W2115009157","doi":"10.1128/jb.00832-06","title":"Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from <i>Streptococcus mutans</i>","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"University of Toronto; Killam Trusts; Dalhousie University; Nova Scotia Health Research Foundation","keywords":"Biology; Peptide; Quorum sensing; Biochemistry; Streptococcus mutans; Peptide sequence; Mutant; Amino acid; Signal transduction; Residue (chemistry); Receptor; Cell biology; Bacteria; Genetics; Gene; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009059456,0.0002696192,0.000153404,0.0000985361,0.00008815216,0.000197656,0.0001203437,0.0001757823,0.0003411565],"category_scores_gemma":[0.0001894381,0.00007965949,0.0002603189,0.0001077288,0.00009938284,0.0001297336,0.00006689095,0.0002620711,0.0001248736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002160264,"about_ca_system_score_gemma":0.0001625371,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004679798,"about_ca_topic_score_gemma":0.0004668291,"domain_scores_codex":[0.9999338,0.00001642741,0.000006356489,0.000009841265,0.0000229084,0.0000106788],"domain_scores_gemma":[0.9999052,0.00002072995,0.00003149712,0.000005424816,0.00001598962,0.00002120617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008963834,0.00002471467,0.0003406149,0.00002008516,0.000004043352,0.00003122943,0.000008388902,0.0003137871,0.998334,0.00002692617,0.000006969303,0.0007997184],"study_design_scores_gemma":[0.00001158044,0.0004382194,0.004482992,0.000004746288,0.00001933663,0.0002034361,0.00001687126,0.001896701,0.9922583,0.00002599054,0.0006365868,0.000005245427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987255,0.0002604214,0.0006162026,0.00001980822,0.00000309059,0.000007686081,0.0001026196,0.00000694359,0.0002576092],"genre_scores_gemma":[0.9964516,0.0002063792,0.002279806,0.00002099496,0.000002572813,0.00000793103,0.0007679343,0.000005453814,0.0002573182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004679798,"threshold_uncertainty_score":0.001567364,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009178156343394424,"score_gpt":0.2463158244143127,"score_spread":0.2371376680709182,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}