{"id":"W2115169857","doi":"10.1111/j.1365-2672.2009.04262.x","title":"Comparative genomics-guided loop-mediated isothermal amplification for characterization of<i>Pseudomonas syringae</i>pv. phaseolicola","year":2009,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Canadian Food Inspection Agency","funders":"","keywords":"Pseudomonas syringae; Biology; Pathovar; Microbiology; Comparative genomics; Pathogenic bacteria; Pseudomonas fluorescens; Pseudomonas; Genomics; Genome; Bacteria; Pseudomonadaceae; Genetics; Pathogen; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002776121,0.0001514202,0.0005001616,0.00003383934,0.00008889871,0.0000142007,0.0002298685,0.0001275803,0.00002435645],"category_scores_gemma":[0.00001739389,0.00006955856,0.0001152866,0.00013432,0.00007447062,0.00006304233,0.00002076342,0.0001024005,0.000008885265],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004216466,"about_ca_system_score_gemma":0.00002315001,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001463464,"about_ca_topic_score_gemma":0.000004799413,"domain_scores_codex":[0.9989121,0.00004226994,0.0006215586,0.0001656888,0.0000431806,0.0002151943],"domain_scores_gemma":[0.9986175,0.0001761703,0.0009145972,0.00004183277,0.0002015543,0.00004832784],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004864989,0.0001344245,0.00004534777,0.000004540019,0.00005798833,7.372659e-7,0.0002116848,0.00000460021,0.9968661,0.0001398042,0.0002769288,0.001771359],"study_design_scores_gemma":[0.001024377,0.0006735857,0.02820833,0.00001843592,0.00005859325,0.0001285136,0.0001301334,0.00001510256,0.9466342,0.0001616809,0.02275069,0.000196369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998203,0.00005271066,0.00017185,0.0004374328,0.0001318862,0.000372785,0.0004747376,0.00001249765,0.0001430912],"genre_scores_gemma":[0.9982032,0.00009294548,0.0005631892,0.0003349742,0.0002585372,0.000007960259,0.0005197307,0.000001224734,0.00001819483],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0502319,"threshold_uncertainty_score":0.2836516,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02880870834232065,"score_gpt":0.2402712025894053,"score_spread":0.2114624942470846,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}