{"id":"W2115170904","doi":"10.1128/genomea.00053-13","title":"Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Joint Genome Institute; U.S. Department of Energy; Office of Science; Russian Foundation for Basic Research; National Science Foundation","keywords":"Strain (injury); Whole genome sequencing; Biology; Genome; Gene; Bacteria; Metabolic engineering; Genetics; Computational biology; Biotechnology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003125014,0.0003146847,0.0003657307,0.0001100308,0.0000923394,0.000039077,0.0003586025,0.0001920149,0.0005627544],"category_scores_gemma":[0.00003303232,0.0003002132,0.0001584485,0.0001969039,0.0001268633,0.00002429208,0.0001471228,0.0001217299,0.0002202648],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003570509,"about_ca_system_score_gemma":0.0001077504,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000277413,"about_ca_topic_score_gemma":0.000009270358,"domain_scores_codex":[0.9980689,0.0001197576,0.0005317073,0.000563416,0.0001978601,0.0005183193],"domain_scores_gemma":[0.9986755,0.000005434973,0.0002413724,0.0006056167,0.0003331194,0.0001389313],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007727052,0.00009107286,0.0000610038,0.00005899803,0.0001383517,0.000003080366,0.0001491172,0.0001369204,0.9981497,0.00001585661,0.0007151217,0.0004035378],"study_design_scores_gemma":[0.002207436,0.0008059505,0.008173791,0.00004050742,0.000150745,0.00005145002,0.0002118043,0.00004855116,0.5336477,0.000163169,0.4535365,0.0009623907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922227,0.001537125,0.001975962,0.0001662127,0.0007146753,0.0006045732,0.002291461,0.00002153414,0.0004657599],"genre_scores_gemma":[0.9891467,0.0005447314,0.001934407,0.0008586006,0.0004935127,0.00008452602,0.003696584,0.00005378879,0.003187134],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.464502,"threshold_uncertainty_score":0.999945,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01611843728715611,"score_gpt":0.2325231032630823,"score_spread":0.2164046659759261,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}