{"id":"W2115174145","doi":"10.1128/jcm.00365-07","title":"High-Resolution Genetic Fingerprinting of European Strains of <i>Anaplasma phagocytophilum</i> by Use of Multilocus Variable-Number Tandem-Repeat Analysis","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Public Health Agency of Canada","funders":"Wellcome Trust","keywords":"Biology; Anaplasma phagocytophilum; Genetics; Variable number tandem repeat; Tandem repeat; Multilocus sequence typing; Typing; Multiple Loci VNTR Analysis; Anaplasma; Allele; Molecular epidemiology; Genotype; Tick; Genome; Gene; Virology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083864,0.0001912784,0.0002215486,0.0008780178,0.0001669687,0.0004243705,0.0002031008,0.0003340158,0.0001629111],"category_scores_gemma":[0.001348167,0.0001050677,0.0002351206,0.0004305577,0.0002188541,0.0001531264,0.0002706448,0.0002136271,0.0001135332],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000129342,"about_ca_system_score_gemma":0.0001286657,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00092293,"about_ca_topic_score_gemma":0.0008244055,"domain_scores_codex":[0.9993566,0.0002530387,0.00008343168,0.0001513823,0.00009680073,0.00005873568],"domain_scores_gemma":[0.9993561,0.0002154339,0.0002086085,0.00005970785,0.0001034919,0.0000566344],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003530776,0.00007535365,0.0881086,0.00004912028,0.00006651021,0.0001889652,0.0003325675,0.000460533,0.897838,0.0001222079,0.00003737484,0.01236772],"study_design_scores_gemma":[0.00004808196,0.001432336,0.7258742,0.00004438509,0.0001692304,0.00342567,0.0005757855,0.00508493,0.2595277,0.0002578144,0.003516357,0.00004348568],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971544,0.0001257887,0.002367609,0.0000112202,0.000002487149,0.00001222901,0.0001388504,0.000007179441,0.0001801705],"genre_scores_gemma":[0.9910365,0.0001295986,0.008159962,0.00001927596,0.000004196861,0.00001277906,0.0005046928,0.000004541968,0.0001282738],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00092293,"threshold_uncertainty_score":0.004435182,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02746040949328242,"score_gpt":0.3050934854064325,"score_spread":0.2776330759131501,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}