{"id":"W2115405849","doi":"10.1007/s13199-012-0154-6","title":"Simultaneous genome sequencing of symbionts and their hosts","year":2011,"lang":"en","type":"article","venue":"Symbiosis","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Directorate for Biological Sciences; University of Toronto; University of Edinburgh; National Science Foundation","keywords":"Biology; Genome; DNA sequencing; Computational biology; Bacterial genome size; In silico; Deep sequencing; Sequence assembly; Genetics; Whole genome sequencing; Evolutionary biology; Gene; Transcriptome","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003741357,0.0004213142,0.0008047996,0.0007152488,0.0006238373,0.0009791492,0.0003205139,0.0008934878,0.001597814],"category_scores_gemma":[0.00110658,0.0004363689,0.0006792934,0.0008774144,0.0001632706,0.0006295206,0.0009558089,0.0008098874,0.0007846035],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000426239,"about_ca_system_score_gemma":0.0006052346,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001951002,"about_ca_topic_score_gemma":0.005052778,"domain_scores_codex":[0.9995222,0.00005156239,0.00001969629,0.0002175865,0.0001425462,0.0000464582],"domain_scores_gemma":[0.999551,0.00009952921,0.00005379034,0.00009144009,0.0001109789,0.00009338703],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002209436,0.00002204754,0.006545363,0.00008774477,0.00006713717,0.00004885334,0.0001331995,0.0007382836,0.9725736,0.0004113553,0.0002723823,0.01887905],"study_design_scores_gemma":[0.0001530215,0.0007520395,0.2861612,0.00007608937,0.0005578874,0.001306242,0.0006534782,0.03822629,0.6125451,0.004552096,0.05490053,0.0001160457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9083403,0.001752473,0.07275941,0.0001846145,0.00008793596,0.0001109683,0.01151382,0.0008343188,0.004416186],"genre_scores_gemma":[0.7616884,0.001045147,0.1975231,0.0002731717,0.00004242139,0.0002351055,0.03300047,0.0003728188,0.005819299],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001951002,"threshold_uncertainty_score":0.005345225,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02886853729101661,"score_gpt":0.1884650440298956,"score_spread":0.1595965067388789,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}