{"id":"W2115576371","doi":"10.1534/genetics.105.049312","title":"Recombination in Thermotoga: Implications for Species Concepts and Biogeography","year":2005,"lang":"en","type":"article","venue":"Genetics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Thermotoga maritima; Biogeography; Recombination; Evolutionary biology; Genetics; Human genetics; Ecology; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006898189,0.0001783985,0.0003441874,0.0009254395,0.000697643,0.000864883,0.0003686552,0.0005515495,0.0007946285],"category_scores_gemma":[0.001656772,0.00009495609,0.0001575232,0.00110632,0.001275001,0.001491753,0.0008428869,0.00047382,0.0001254664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003720538,"about_ca_system_score_gemma":0.0002190564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003757992,"about_ca_topic_score_gemma":0.0005095238,"domain_scores_codex":[0.9997533,0.0001036523,0.0000232995,0.00006457384,0.00003183394,0.00002335687],"domain_scores_gemma":[0.9989113,0.0004196382,0.0004194425,0.00008772789,0.00007457912,0.00008744739],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009237331,0.0001110063,0.3673754,0.001534862,0.0002513074,0.001991687,0.0243129,0.007159234,0.3257124,0.1262746,0.000520682,0.1438322],"study_design_scores_gemma":[0.00005399073,0.0005640392,0.691056,0.0004366054,0.0002052019,0.007794241,0.01422672,0.007544632,0.017941,0.2319807,0.02807191,0.0001249187],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9809505,0.007758938,0.008163419,0.000937191,0.00001953873,0.00001116716,0.00006012153,0.00002088914,0.002078204],"genre_scores_gemma":[0.9954157,0.001652828,0.002523036,0.0001056186,0.00002303758,0.000007270758,0.00007086895,0.000005660378,0.0001960898],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009254395,"threshold_uncertainty_score":0.003648162,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01779693544908763,"score_gpt":0.2751624585102899,"score_spread":0.2573655230612023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}