{"id":"W2115833671","doi":"10.1146/annurev.ecolsys.39.110707.173342","title":"The Impact of Natural Selection on the Genome: Emerging Patterns in <i>Drosophila</i> and <i>Arabidopsis</i>","year":2008,"lang":"en","type":"article","venue":"Annual Review of Ecology Evolution and Systematics","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Biology; Genome; Natural selection; Evolutionary biology; Genetics; Negative selection; Population; Noncoding DNA; Directional selection; Gene; Computational biology; Genetic variation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003764439,0.00008049722,0.0002023716,0.00002319799,0.0001211295,0.000002595266,0.00007457777,0.00006344934,0.0000042127],"category_scores_gemma":[0.0001788403,0.00004502999,0.00006403148,0.00008317897,0.00009531147,0.000003548463,0.0000392553,0.00006837606,5.489758e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001328352,"about_ca_system_score_gemma":0.00003548363,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002031514,"about_ca_topic_score_gemma":0.00004277456,"domain_scores_codex":[0.9992249,0.0001993353,0.0003067509,0.0001004153,0.00007736877,0.00009124902],"domain_scores_gemma":[0.9994643,0.00005989478,0.0002204021,0.0001217083,0.0001140637,0.00001967495],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002106111,0.0001867521,0.9434734,0.01421661,0.0005711023,0.000004209723,0.002300071,0.0008218962,0.01796846,0.00786256,0.01128021,0.001104146],"study_design_scores_gemma":[0.0003885382,0.0004766127,0.995634,0.001006704,0.00005093055,0.0001475738,0.0005355679,0.0003693413,0.0001970861,0.000223877,0.0008316853,0.0001381231],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9824033,0.01680866,0.00002962744,0.0002482422,0.00006290527,0.0003046443,0.00002585397,0.000001334798,0.0001154693],"genre_scores_gemma":[0.981188,0.01854555,0.00001780178,0.0001385277,0.00002293976,0.000005660237,0.00001181067,0.000002924633,0.00006677445],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05216058,"threshold_uncertainty_score":0.183627,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01017460742112133,"score_gpt":0.2574954771672602,"score_spread":0.2473208697461389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}