{"id":"W2115919296","doi":"10.1128/jcm.01946-08","title":"<i>Mycobacterium tuberculosis</i> in Ontario, Canada: Insights from IS <i>6110</i> Restriction Fragment Length Polymorphism and Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat Genotyping","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto Public Health","funders":"","keywords":"Variable number tandem repeat; Genotyping; Restriction fragment length polymorphism; Mycobacterium tuberculosis; Tandem repeat; Biology; Genotype; Tuberculosis; Genetics; Polymorphism (computer science); Virology; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003971116,0.0002605297,0.0003249132,0.001452164,0.002459855,0.001194412,0.0006769045,0.0003706077,0.001225518],"category_scores_gemma":[0.001016342,0.0003472457,0.0002155746,0.003515764,0.0007871707,0.0002553843,0.0005399017,0.0003848998,0.0001934965],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.02222776,"about_ca_system_score_gemma":0.03383167,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9962109,"about_ca_topic_score_gemma":0.9985009,"domain_scores_codex":[0.9993231,0.00005529063,0.00003057638,0.00007920622,0.0002394457,0.0002723154],"domain_scores_gemma":[0.9989496,0.00006404688,0.0002246036,0.00002103009,0.0005255809,0.0002151109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000142799,0.0000472347,0.9666919,0.0002009631,0.00004917491,0.0008931786,0.0056349,0.0002959287,0.003785036,0.0003768288,0.002045778,0.01983623],"study_design_scores_gemma":[0.000006903517,0.00001663609,0.9932789,0.00006122068,0.00002283759,0.0001663649,0.002838793,0.0001779434,0.0001905862,0.00004026792,0.003190003,0.000009417623],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9893182,0.002356341,0.0002671001,0.0009389356,0.00001134379,0.00006674516,0.002236177,0.000007554404,0.004797622],"genre_scores_gemma":[0.9951668,0.001477162,0.0004531079,0.0003172668,0.000007655735,0.00001505675,0.0007929927,0.000007853185,0.001762016],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02222776,"threshold_uncertainty_score":0.1612745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02871213878605855,"score_gpt":0.313570837706622,"score_spread":0.2848586989205635,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}