{"id":"W2116156881","doi":"10.1261/rna.1056108","title":"Group II introns in Eubacteria and Archaea: ORF-less introns and new varieties","year":2008,"lang":"en","type":"article","venue":"RNA","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Calgary","funders":"Canadian Institutes of Health Research; Universitetet i Oslo; Fondation pour la Recherche Médicale","keywords":"Group II intron; Intron; Biology; Group I catalytic intron; ORFS; Minor spliceosome; Genetics; Genome; Open reading frame; Bacterial genome size; Ribozyme; Phylogenetic tree; Gene; RNA splicing; RNA; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002363331,0.0002180202,0.0002656681,0.001271509,0.0002804499,0.0007920593,0.0002314886,0.000315559,0.0005027374],"category_scores_gemma":[0.0005819679,0.0001218207,0.0002277465,0.0009216615,0.000350668,0.0007218372,0.0003885781,0.0003311204,0.000185318],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001338885,"about_ca_system_score_gemma":0.0001868301,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001325018,"about_ca_topic_score_gemma":0.0002362018,"domain_scores_codex":[0.9998515,0.00001067204,0.00002532445,0.0000531019,0.00004127042,0.00001818896],"domain_scores_gemma":[0.999459,0.0001284077,0.0001616151,0.000086612,0.00007318328,0.00009128242],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001264533,0.00006958689,0.06817975,0.000894507,0.00007691981,0.001540748,0.001354158,0.0003821666,0.7810796,0.003258941,0.0003323546,0.1415666],"study_design_scores_gemma":[0.0000820069,0.001306602,0.5509003,0.0004964196,0.0006987905,0.0205858,0.002032345,0.001997081,0.2523995,0.01102946,0.1583245,0.00014711],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9780539,0.01299952,0.00552186,0.0001004563,0.00005832444,0.0000131416,0.0004133368,0.00007818194,0.002761274],"genre_scores_gemma":[0.9725727,0.006798281,0.01494122,0.0001284046,0.0001884222,0.00003503619,0.002873558,0.00007133253,0.002391048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001271509,"threshold_uncertainty_score":0.001681805,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01772748897762994,"score_gpt":0.215219202855821,"score_spread":0.197491713878191,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}