{"id":"W2116168117","doi":"10.1128/aac.01763-10","title":"Characteristics of NDM-1-Producing Escherichia coli Isolates That Belong to the Successful and Virulent Clone ST131","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Virulence; Escherichia coli; Microbiology; clone (Java method); Biology; Phylogenetic tree; Enterobacteriaceae; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000140433,0.0001856313,0.0002232764,0.0000229881,0.0001133668,0.00004100197,0.0002443272,0.00009945624,0.00004857417],"category_scores_gemma":[0.00001693222,0.0001397246,0.00004578496,0.00006148243,0.0001482788,0.000008463399,0.000155689,0.00006329422,0.000002557894],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004832526,"about_ca_system_score_gemma":0.00001925422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001426377,"about_ca_topic_score_gemma":0.00003566339,"domain_scores_codex":[0.9991039,0.00003189895,0.0002277007,0.0003514285,0.00006390697,0.0002211903],"domain_scores_gemma":[0.9993385,0.000006235861,0.0001443874,0.0003924346,0.00005267243,0.00006578472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003218411,0.0001174072,0.4067188,0.00005928917,0.00009923056,0.000001767969,0.001121452,2.301873e-7,0.584506,0.00001347916,0.003797215,0.003243259],"study_design_scores_gemma":[0.0003426743,0.0001513326,0.6422315,0.00004336888,0.00001969329,0.00000568515,0.00006074466,0.000005066037,0.3486702,0.000009235969,0.008291937,0.0001684805],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985094,0.00008204773,0.0002566395,0.0006130512,0.0001567155,0.0002601412,0.00003497835,0.000007284702,0.00007972655],"genre_scores_gemma":[0.9931072,0.002788282,0.001309352,0.002396745,0.0001303723,0.000002613222,0.00002174615,0.00002998212,0.0002137064],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2358358,"threshold_uncertainty_score":0.5697806,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0147470451207075,"score_gpt":0.2323181225899671,"score_spread":0.2175710774692596,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}