{"id":"W2116178249","doi":"10.1128/iai.69.3.1420-1427.2001","title":"cDNA Array Analysis of Altered Gene Expression in Human Endothelial Cells in Response to<i>Chlamydia pneumoniae</i>Infection","year":2001,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Heart and Stroke Foundation of Canada","keywords":"Biology; Chlamydophila pneumoniae; Chemokine; Gene expression; Molecular biology; Immunology; Microbiology; Gene; Chlamydia; Chlamydiaceae; Immune system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001667715,0.0001826096,0.0004195977,0.002288343,0.0002298335,0.00002228184,0.00009394532,0.0002353221,0.0003768412],"category_scores_gemma":[0.0003606227,0.0001833712,0.0001238422,0.002011189,0.000156886,0.0002191089,0.00007908534,0.0006496337,0.00005163649],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001759361,"about_ca_system_score_gemma":0.00004346336,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01059958,"about_ca_topic_score_gemma":0.002795696,"domain_scores_codex":[0.9970072,0.001719757,0.0005057264,0.0003831142,0.00006448959,0.0003197216],"domain_scores_gemma":[0.9989203,0.0002760044,0.0001381632,0.0004967508,0.0001326225,0.00003622347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006132926,0.0004335905,0.3581063,0.000006098181,0.0000925132,0.000001448015,0.0004886361,0.000542942,0.6388155,0.000004467723,0.00001364567,0.000881562],"study_design_scores_gemma":[0.0006283263,0.0001893237,0.5333394,0.00001678922,0.00002952331,0.0000155759,0.0000301075,0.000004572029,0.4641526,0.00001873893,0.001483126,0.00009191154],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977494,0.00007627481,0.0005818478,0.00005038255,0.0003939561,0.0004019572,0.00002412838,0.00004611549,0.0006759715],"genre_scores_gemma":[0.998997,0.0003292784,0.00002637355,0.00001885551,0.00002411619,0.00006136247,0.00004278131,0.00001383596,0.0004863686],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.175233,"threshold_uncertainty_score":0.9959889,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0233802024706398,"score_gpt":0.3119182838794305,"score_spread":0.2885380814087907,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}