{"id":"W2116400734","doi":"10.1503/cmaj.050105","title":"Bordetella pertussis: the intersection of genomics and pathobiology","year":2005,"lang":"en","type":"review","venue":"Canadian Medical Association Journal","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Poultry Industry Council","keywords":"Bordetella pertussis; Whooping cough; Incidence (geometry); Disease; Genomics; Medicine; Bordetella; Genome; Immunology; Biology; Vaccination; Genetics; Bacteria; Gene; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007199658,0.0008934691,0.001347865,0.002170885,0.0005185572,0.001411137,0.001002191,0.001253825,0.003198388],"category_scores_gemma":[0.0006370674,0.0002980099,0.0002308423,0.00278222,0.000904454,0.001611011,0.0005571802,0.001656214,0.003173662],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002418294,"about_ca_system_score_gemma":0.00303008,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01115697,"about_ca_topic_score_gemma":0.01738828,"domain_scores_codex":[0.9997774,0.00003178514,0.00001747792,0.00003067839,0.000111045,0.00003162784],"domain_scores_gemma":[0.9996758,0.00009148159,0.00002925261,0.000009024957,0.000124869,0.00006972607],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006918661,0.00004291287,0.0002999445,0.006096902,0.00003128571,0.0004035634,0.000106474,0.0002673599,0.002515891,0.005138569,0.04307542,0.9419525],"study_design_scores_gemma":[0.000007738208,0.00003761046,0.001113616,0.001116653,0.00001717153,0.000778332,0.00008498278,0.00003774571,0.0003095232,0.001838522,0.9946455,0.00001253986],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00011808,0.9965246,0.0001567058,0.0009963177,0.0003067264,0.000004803514,0.00001285394,0.00001347703,0.001866479],"genre_scores_gemma":[0.0007567025,0.9973069,0.0002880886,0.0002675703,0.0002341023,0.000003668912,0.0000205663,0.000001407082,0.001121039],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.01115697,"threshold_uncertainty_score":0.02218407,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01375475328677827,"score_gpt":0.2637152746973883,"score_spread":0.24996052141061,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}