{"id":"W2116412804","doi":"10.1139/z04-112","title":"Phylogenetic relationships and divergence times of the genus<i>Tokudaia</i>within Murinae (Muridae; Rodentia) inferred from the nucleotide sequences encoding the Cyt<i>b</i>gene, RAG 1, and IRBP","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Zoology","topic":"Animal Ecology and Behavior Studies","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Phylogenetic tree; Cytochrome b; Phylogenetics; Genus; Zoology; Evolutionary biology; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000251418,0.0002115345,0.0002992461,0.00129246,0.000411672,0.0005300064,0.0002577807,0.0002776511,0.0007972289],"category_scores_gemma":[0.0005948413,0.0002072705,0.0002899559,0.000531994,0.0003710526,0.0003016338,0.0005516646,0.000352862,0.0002251846],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002625555,"about_ca_system_score_gemma":0.0001364452,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001737749,"about_ca_topic_score_gemma":0.003223405,"domain_scores_codex":[0.9998844,0.00002342065,0.00001354306,0.00004130285,0.00001255401,0.00002475486],"domain_scores_gemma":[0.9997293,0.00006628426,0.0001036351,0.00001725575,0.00003886552,0.00004458491],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001167683,0.00006603767,0.7228804,0.000400553,0.0004260633,0.0005943869,0.007657064,0.001420956,0.2098945,0.0009249442,0.0001934978,0.05437395],"study_design_scores_gemma":[0.00001989663,0.0001706925,0.9913693,0.00008044492,0.0001308421,0.00054659,0.001533498,0.002149025,0.001312629,0.0001865573,0.002479047,0.00002146066],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987802,0.0005204537,0.0002301899,0.000009139392,0.000003430604,0.000004622687,0.00002968396,0.000008111367,0.0004141141],"genre_scores_gemma":[0.9984634,0.0002793482,0.0008566383,0.00001248682,0.000004929798,0.0000129507,0.0002311394,0.00000590698,0.0001332615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001737749,"threshold_uncertainty_score":0.003455341,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01971526592802594,"score_gpt":0.2097555420645242,"score_spread":0.1900402761364982,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}