{"id":"W2116537937","doi":"10.1261/rna.033134.112","title":"The box C/D sRNP dimeric architecture is conserved across domain Archaea","year":2012,"lang":"en","type":"article","venue":"RNA","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Dalhousie University; Yale University; National Institutes of Health; National Science Foundation","keywords":"Biology; Archaea; Computational biology; Domain (mathematical analysis); Evolutionary biology; Genetics; Conserved sequence; Base sequence; Bacteria; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004142352,0.0001437417,0.0001044308,0.00000840016,0.0002782703,0.00003271092,0.0002704734,0.0001233166,0.00004903947],"category_scores_gemma":[0.0000599912,0.00009623938,0.0001091798,0.00005428649,0.0001257765,0.000002298057,0.0001377066,0.00009564787,0.00006566945],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006155268,"about_ca_system_score_gemma":0.00002439364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002051826,"about_ca_topic_score_gemma":0.0000156261,"domain_scores_codex":[0.9989473,0.0001185925,0.0001349119,0.0001884192,0.0001270131,0.000483815],"domain_scores_gemma":[0.9993126,0.00003209597,0.00006581112,0.0004503909,0.00002385831,0.0001152895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000666378,0.00002187177,0.0004793885,0.000007518938,0.00004887778,0.00000106742,0.0004465743,8.540141e-7,0.9673805,0.0002423895,0.002314537,0.0289898],"study_design_scores_gemma":[0.0001183841,0.00005383622,0.0005305706,0.000005613642,0.00000546477,0.00001708751,0.0001389078,6.612707e-7,0.6620674,0.0009231793,0.3360177,0.0001212399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9833214,0.005547506,0.007121908,0.001542067,0.0004311401,0.0002241107,0.0000241162,0.00001814624,0.001769555],"genre_scores_gemma":[0.9936334,0.0002329494,0.001914074,0.00104298,0.0004649833,0.0000456658,0.0000139048,0.00002553773,0.002626464],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3337031,"threshold_uncertainty_score":0.3924528,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01080568004875774,"score_gpt":0.2574921087784116,"score_spread":0.2466864287296538,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}