{"id":"W2116705812","doi":"10.1016/j.biocontrol.2013.10.015","title":"Expression of the Pseudomonas chlororaphis strain PA23 Rsm system is under control of GacA, RpoS, PsrA, quorum sensing and the stringent response","year":2013,"lang":"en","type":"article","venue":"Biological Control","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"rpoS; Pseudomonas chlororaphis; Biology; Quorum sensing; Microbiology; Strain (injury); Bacterial strain; Pseudomonas; Bacteria; Genetics; Biofilm; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007616642,0.0001599004,0.0003718071,0.00001165747,0.0002691557,0.00004106033,0.0002878995,0.000152693,0.0001337988],"category_scores_gemma":[0.0002030045,0.00003910633,0.0001978459,0.0001213533,0.000392065,0.00005902662,0.0000944006,0.000198014,0.000006012451],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002027233,"about_ca_system_score_gemma":0.000008710386,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006808478,"about_ca_topic_score_gemma":0.0000429176,"domain_scores_codex":[0.9979388,0.001070601,0.0004056736,0.0002063571,0.000143094,0.0002355482],"domain_scores_gemma":[0.9976296,0.00174389,0.0003067993,0.0001332747,0.0001273794,0.00005904479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001181851,0.00004878411,0.002272183,0.000004919347,0.00003244148,5.308923e-7,0.00004249431,0.000002813923,0.9924503,0.0001576867,0.0001379568,0.003668045],"study_design_scores_gemma":[0.005264534,0.001021938,0.8607315,0.0003471634,0.0000988733,0.00007626742,0.00522216,0.002636418,0.119611,0.0007220428,0.003868741,0.0003993648],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936103,0.0004867708,0.0001031645,0.004602641,0.0001020429,0.0006723884,0.0003429767,0.00002261363,0.00005709711],"genre_scores_gemma":[0.9993128,0.00004231253,0.00001288346,0.0005115017,0.00004799149,0.00001580897,0.000005269903,9.080944e-7,0.00005053861],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8728393,"threshold_uncertainty_score":0.2070156,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01809641121391811,"score_gpt":0.204280160811417,"score_spread":0.1861837495974989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}