{"id":"W2116716923","doi":"10.1002/mbo3.141","title":"Developing an international <i>Pseudomonas aeruginosa</i> reference panel","year":2013,"lang":"en","type":"article","venue":"MicrobiologyOpen","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Universiteit Gent; Alere","keywords":"Virulence; Pseudomonas aeruginosa; Biology; Microbiology; Pathogen; Serotype; Organism; Opportunistic pathogen; Genotype; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001034438,0.0001554851,0.0001319673,0.0000295411,0.0000857063,0.0000767531,0.0003887794,0.0002061141,0.0002367597],"category_scores_gemma":[0.00002383793,0.0001373484,0.00003820365,0.00003833782,0.00008472686,0.00001804753,0.000249708,0.00008754265,0.0002982437],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001691446,"about_ca_system_score_gemma":0.00006047038,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002178235,"about_ca_topic_score_gemma":0.00006161439,"domain_scores_codex":[0.9990425,0.00006249578,0.0001949416,0.0003942068,0.00003128868,0.0002745589],"domain_scores_gemma":[0.9994534,0.000005747308,0.00007110894,0.0002927881,0.0001139403,0.00006303869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002191882,0.00001740429,0.001842682,0.000001987441,0.00002720224,0.000001221169,0.00001580932,8.184485e-7,0.9919479,0.0003064786,0.00201151,0.003805055],"study_design_scores_gemma":[0.0003585929,0.0001179421,0.01484334,0.00001144268,0.00000521147,0.00008828262,0.00004907436,0.000003768499,0.7165264,0.00003567633,0.2676575,0.0003027629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953911,0.00003978764,0.0001061697,0.0006403214,0.0004407348,0.0001900408,0.00002826161,0.00002131391,0.003142274],"genre_scores_gemma":[0.9874397,0.00008587019,0.008039626,0.002020836,0.0002865458,0.00001529497,0.001127606,0.00001801173,0.0009665372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2754215,"threshold_uncertainty_score":0.5600906,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03395470911895028,"score_gpt":0.2615956138268412,"score_spread":0.2276409047078909,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}