{"id":"W2116817862","doi":"10.1128/iai.01370-12","title":"N-Glycosylation of Campylobacter jejuni Surface Proteins Promotes Bacterial Fitness","year":2013,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":87,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Alberta Innovates","keywords":"Campylobacter jejuni; Proteases; Biology; Microbiology; Protease; Glycosylation; Biochemistry; N-linked glycosylation; Glycan; Enzyme; Bacteria; Glycoprotein","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002439781,0.0001089441,0.0001822451,0.00001014648,0.0001475196,0.00003680723,0.00006788591,0.0001243069,0.001299883],"category_scores_gemma":[0.0001014732,0.00004585402,0.00005159996,0.0001547281,0.00008351971,0.0002362677,0.00005547106,0.0001163212,0.00003026429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001230801,"about_ca_system_score_gemma":0.000005129773,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0111966,"about_ca_topic_score_gemma":0.0005780522,"domain_scores_codex":[0.999147,0.0002607015,0.0002306132,0.0001415456,0.00006249959,0.0001576692],"domain_scores_gemma":[0.9994857,0.0001469371,0.0001311213,0.00006234939,0.0001181035,0.00005580818],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002101931,0.0001063563,0.225041,0.00001069881,0.0000106376,8.609422e-8,0.00006825905,0.000001618004,0.7538354,0.00005541065,0.00006842758,0.02078111],"study_design_scores_gemma":[0.0001313025,0.0003004913,0.9751268,0.0000130442,0.000006230637,0.000007571605,0.00003378528,0.00006320359,0.02116371,0.0006360298,0.002411943,0.0001058667],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984655,0.00002704431,0.00001614621,0.0002918007,0.000190703,0.00034441,0.00001028499,0.00005064903,0.0006034339],"genre_scores_gemma":[0.9995819,0.00005445698,0.0000492657,0.00004498363,0.00009272706,0.000016204,0.00006791152,8.474405e-7,0.00009166497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7500858,"threshold_uncertainty_score":0.999613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.020903913085863,"score_gpt":0.2247316981573396,"score_spread":0.2038277850714766,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}