{"id":"W2116911541","doi":"10.1086/315761","title":"Molecular Epidemiology of<i>Streptococcus pneumoniae</i>Causing Invasive Disease in 5 Countries","year":2000,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Serotype; Streptococcus pneumoniae; Penicillin; Epidemiology; Molecular epidemiology; Bacteremia; Case fatality rate; Pneumococcal infections; Biology; Microbiology; Typing; Multilocus sequence typing; Pneumococcal disease; Antibiotics; Virology; Medicine; Genotype; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004549751,0.0001692555,0.0005424712,0.0002432731,0.000107416,0.000005697115,0.00009635098,0.0000616731,0.0002227379],"category_scores_gemma":[0.001075317,0.0001080412,0.0002888806,0.000311533,0.0003352494,0.000126521,0.00002119992,0.0003052503,0.00001452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001009499,"about_ca_system_score_gemma":0.0005406011,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003305479,"about_ca_topic_score_gemma":0.00001595489,"domain_scores_codex":[0.9982214,0.0004672987,0.000738929,0.0001094776,0.000210706,0.000252215],"domain_scores_gemma":[0.9980074,0.0008084003,0.0004105963,0.0002699987,0.0002221551,0.0002814858],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002428642,0.000378622,0.9856436,0.0001037898,0.0001457815,0.0003646052,0.0001499987,0.00892886,0.003165934,0.0001094289,0.00007473181,0.0006917678],"study_design_scores_gemma":[0.001674165,0.0007031971,0.991694,0.000543951,0.0008354576,0.000513918,0.00008056858,0.00007523056,0.0006340136,0.002250686,0.0008496598,0.000145197],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948664,0.002950132,0.00006526314,0.001288663,0.000141133,0.0002717245,0.00002038725,0.00002157527,0.0003747364],"genre_scores_gemma":[0.9966714,0.001675016,0.000001891895,0.001473239,0.0001264891,0.000008496948,0.00000196727,0.00001764821,0.00002385914],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008853628,"threshold_uncertainty_score":0.4405794,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01355882030078252,"score_gpt":0.2883371305256995,"score_spread":0.2747783102249169,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}