{"id":"W2117212042","doi":"10.1046/j.1365-294x.2003.02070.x","title":"Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes","year":2004,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Primate Behavior and Ecology","field":"Psychology","cited_by":285,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Ministerio de Economía y Competitividad","keywords":"Mitochondrial DNA; Biology; mtDNA control region; Evolutionary biology; Taxon; Genetics; Nuclear DNA; Genome; Gene; Ecology; Genotype; Haplotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001463559,0.0001520588,0.0004589506,0.0003787462,0.00009640175,0.00001082143,0.0004182109,0.0002385326,0.00442309],"category_scores_gemma":[0.00004845749,0.0001639483,0.00007713368,0.000440158,0.000150544,0.00005756662,0.0003401446,0.0001172681,0.0003125092],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006407301,"about_ca_system_score_gemma":0.00004146178,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004380212,"about_ca_topic_score_gemma":0.004325133,"domain_scores_codex":[0.9985801,0.0001242372,0.000313565,0.0005806529,0.00007655356,0.0003249158],"domain_scores_gemma":[0.9987758,0.00006716873,0.00008838294,0.0009332462,0.00003656687,0.00009884379],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008813664,0.004500416,0.6934071,0.00004933065,0.01081127,0.003369841,0.01094652,0.004940274,0.1829263,0.07232933,0.0128711,0.002967244],"study_design_scores_gemma":[0.001104372,0.0003244818,0.9854854,0.000005565655,0.001517547,0.00004159552,0.0003287104,0.0001165736,0.0003563479,0.002540939,0.007927875,0.00025064],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944918,0.0002458245,0.001217745,0.0006376494,0.0002408341,0.000215906,0.0004784169,0.00004772767,0.002424056],"genre_scores_gemma":[0.9946933,0.000007221939,0.001968969,0.00280366,0.00001771869,0.00004269613,0.0003142647,0.00002966093,0.0001224908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2920783,"threshold_uncertainty_score":0.996487,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03122650417341467,"score_gpt":0.3162729395483498,"score_spread":0.2850464353749352,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}