{"id":"W2117414261","doi":"10.1111/2049-632x.12021","title":"Colonization of gerbils with<i>Helicobacter pylori</i>O-chain-deficient mutant SS1 HP0826::Kan results in gastritis and is associated with<i>de novo</i>synthesis of extended homopolymers","year":2013,"lang":"en","type":"article","venue":"Pathogens and Disease","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada","funders":"European Commission; University of Leeds","keywords":"Helicobacter pylori; Gastritis; Biology; Microbiology; Gerbil; Mutant; Metaplasia; Intestinal metaplasia; Atrophy; Pathology; Gene; Medicine; Internal medicine; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002239334,0.000258856,0.0005735183,0.0002075778,0.00006713213,0.00001565625,0.00005472747,0.0001018836,0.00001870993],"category_scores_gemma":[0.0005735934,0.0002016249,0.0000522889,0.0003687012,0.0004209931,0.0000866784,0.00005583346,0.0001379683,0.000001262508],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006535711,"about_ca_system_score_gemma":0.0001336586,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001682988,"about_ca_topic_score_gemma":0.00007506851,"domain_scores_codex":[0.9982412,0.0001132843,0.0005184162,0.0004275657,0.000272296,0.0004271652],"domain_scores_gemma":[0.9985398,0.000163714,0.0002702082,0.0002795944,0.0003292168,0.0004174339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003317017,0.0009422878,0.9550004,0.0002295753,0.0003642689,0.0003403949,0.00177578,0.00001043243,0.03498708,0.00001315309,0.00008193537,0.00293766],"study_design_scores_gemma":[0.005251603,0.001040415,0.9871636,0.0006516542,0.000564024,0.00006554734,0.0007594623,0.0002597606,0.004017937,0.00002244797,0.00002249729,0.0001810349],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962193,0.0005081394,0.00004857551,0.001654199,0.00002487832,0.000619061,0.0008116192,0.00002649843,0.00008770241],"genre_scores_gemma":[0.9986858,0.0003626068,0.000240358,0.0004905222,0.00001626585,0.00009225839,0.00005156823,0.00003083732,0.00002976354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0321632,"threshold_uncertainty_score":0.8222025,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00817932711114324,"score_gpt":0.2145296958653606,"score_spread":0.2063503687542174,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}