{"id":"W2117486835","doi":"10.1002/mc.22085","title":"Genome‐wide screening of aberrant DNA methylation which associated with gene expression in mouse skin cancers","year":2013,"lang":"en","type":"article","venue":"Molecular Carcinogenesis","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Brock University","funders":"Division of Materials Research; National Institute of Environmental Health Sciences; National Cancer Institute","keywords":"Biology; Carcinogenesis; Differentially methylated regions; DNA methylation; Epigenetics; Methylated DNA immunoprecipitation; Methylation; Gene; Cancer research; Genetics; Molecular biology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003028655,0.0002347861,0.0002743596,0.0001587114,0.00005734571,0.00002198613,0.0001820532,0.0002227947,0.00002044042],"category_scores_gemma":[0.0001514254,0.0002221749,0.0000951214,0.00036833,0.00004558103,0.00001314506,0.00008239266,0.00008249114,0.000001795966],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006703231,"about_ca_system_score_gemma":0.0001098031,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005023654,"about_ca_topic_score_gemma":0.0004200079,"domain_scores_codex":[0.9982923,0.0002144176,0.0003870733,0.000461918,0.0003143414,0.0003299508],"domain_scores_gemma":[0.9988766,0.00002475817,0.0002296394,0.0004329401,0.0003347664,0.0001013455],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004448743,0.00003891148,0.04330757,0.00001336543,0.00006394078,0.000003249838,0.00007751449,0.01580611,0.9398512,0.000001534405,0.000004329083,0.0007878281],"study_design_scores_gemma":[0.0006190758,0.0001409198,0.2140905,0.00002293588,0.00002610808,5.068306e-7,0.00004590067,0.0003599297,0.7844173,0.00001752751,0.00004432226,0.0002149257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9619613,0.002192695,0.03516114,0.00004535426,0.00002686575,0.000423105,0.00002054259,0.00001088732,0.0001581523],"genre_scores_gemma":[0.9945241,0.0001633199,0.004636892,0.0000614519,0.0000274555,0.00009100739,0.000355386,0.00005647096,0.00008387706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1707829,"threshold_uncertainty_score":0.9060028,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073754826510669,"score_gpt":0.2228827770540374,"score_spread":0.2121452287889307,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}