{"id":"W2117532887","doi":"10.1093/jac/dkt027","title":"Molecular epidemiology of extended-spectrum  -lactamase-, AmpC  -lactamase- and carbapenemase-producing Escherichia coli and Klebsiella pneumoniae isolated from Canadian hospitals over a 5 year period: CANWARD 2007-11","year":2013,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":154,"is_retracted":false,"has_abstract":true,"ca_institutions":"Shared Health; Health Sciences Centre; University of Manitoba; Calgary Laboratory Services; University of Calgary; St. Boniface Hospital; Public Health Agency of Canada","funders":"","keywords":"Klebsiella pneumoniae; Microbiology; Escherichia coli; Enterobacteriaceae; Klebsiella; Biology; Antibiotics; Beta-lactamase; Molecular epidemiology; Antibiotic resistance; Genotype; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000380757,0.0003352381,0.000726987,0.0001300939,0.00008101732,0.00004981163,0.000223592,0.0003487283,0.0001779609],"category_scores_gemma":[0.0001440865,0.0003132111,0.0001675042,0.0001083983,0.000296879,0.00002940108,0.00005451411,0.0002432201,0.000002830357],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006057717,"about_ca_system_score_gemma":0.0003397833,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01400251,"about_ca_topic_score_gemma":0.002686375,"domain_scores_codex":[0.9980253,0.0001659504,0.000743099,0.0004559974,0.0001190288,0.0004906525],"domain_scores_gemma":[0.9983948,0.00004524947,0.0006590387,0.0003810422,0.0001858678,0.0003340023],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001833209,0.0000415081,0.1570305,0.00003043082,0.0002167759,0.00003286613,0.0001402492,0.00001268244,0.8390952,0.00001180838,0.00307263,0.0001320411],"study_design_scores_gemma":[0.002800105,0.0008345576,0.5842341,0.0002588357,0.0001187152,0.0002442,0.0002383621,0.0001056438,0.4057904,0.0001661032,0.0044806,0.0007283967],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958838,0.00135273,0.0002135319,0.001899964,0.0002429883,0.0002799383,0.00006155411,0.000005935914,0.00005954654],"genre_scores_gemma":[0.9938602,0.001586059,0.002757986,0.001384773,0.0002398629,0.000001286522,0.00002570491,0.00006487824,0.00007924286],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4333048,"threshold_uncertainty_score":0.999932,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004762583644378718,"score_gpt":0.2224214341676421,"score_spread":0.2176588505232634,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}