{"id":"W2117585236","doi":"10.1371/journal.pone.0087645","title":"Integration of Sequence Data from a Consanguineous Family with Genetic Data from an Outbred Population Identifies PLB1 as a Candidate Rheumatoid Arthritis Risk Gene","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":150,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; McGill University and Génome Québec Innovation Centre","funders":"National Institute for Health and Care Research; National Institute of General Medical Sciences; Qatar National Research Fund; Japan Society for the Promotion of Science; U.S. Public Health Service; Japan Science and Technology Agency; National Institutes of Health; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Versus Arthritis; Fonds National de la Recherche Luxembourg; Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Genetics; Population; Allele frequency; Pedigree chart; Allele; Candidate gene; Biology; Locus (genetics); Medicine; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007860995,0.0006251422,0.0008267486,0.001397797,0.0007482672,0.0007925255,0.0006014033,0.0006136526,0.002653392],"category_scores_gemma":[0.001793888,0.0004063247,0.0008083952,0.001726558,0.0003718784,0.0003004238,0.001212876,0.0009004801,0.0005661783],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002717279,"about_ca_system_score_gemma":0.0002830744,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00451495,"about_ca_topic_score_gemma":0.009943345,"domain_scores_codex":[0.9995017,0.0001126281,0.00003383426,0.000219334,0.00007457674,0.00005786072],"domain_scores_gemma":[0.999122,0.0003537389,0.0002141911,0.0001346579,0.0000625374,0.0001129892],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002351384,0.0003287277,0.5031444,0.0007622904,0.003359676,0.004141492,0.001694559,0.005616178,0.3875405,0.001125474,0.00151651,0.08841877],"study_design_scores_gemma":[0.0003203422,0.0006568189,0.9329491,0.000203409,0.002132774,0.00716073,0.0007081899,0.01819849,0.02054176,0.003461207,0.0135707,0.00009645423],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9816265,0.002085611,0.01173081,0.0001381501,0.00001800881,0.00004090763,0.00324455,0.000155096,0.0009604282],"genre_scores_gemma":[0.9788302,0.0007799944,0.01242876,0.0001716094,0.00002249749,0.00006757422,0.00662706,0.0001036489,0.0009686579],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00451495,"threshold_uncertainty_score":0.008977354,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09977477278799306,"score_gpt":0.3187639287372409,"score_spread":0.2189891559492478,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}