{"id":"W2117711940","doi":"10.1093/glycob/cwr041","title":"Structural insights into parallel strategies for germline antibody recognition of lipopolysaccharide from Chlamydia","year":2011,"lang":"en","type":"article","venue":"Glycobiology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Austrian Science Fund; Deutsche Forschungsgemeinschaft; Michael Smith Health Research BC","keywords":"Antigen; Immunoglobulin light chain; Germline; Complementarity determining region; Antibody; Gene; Monoclonal antibody; Biology; Molecular biology; Computational biology; Chemistry; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008022367,0.0001763174,0.0004534747,0.0001253707,0.0000733855,0.000006302897,0.0001425142,0.0002059584,0.0007684604],"category_scores_gemma":[0.00006480318,0.0001269766,0.0001502474,0.00007182182,0.0002897755,0.00009448702,0.00006318866,0.0001867867,0.0000527392],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001638357,"about_ca_system_score_gemma":0.0001341689,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003595697,"about_ca_topic_score_gemma":0.0003055095,"domain_scores_codex":[0.9988433,0.00005570504,0.0003855429,0.000309073,0.0001084162,0.0002980212],"domain_scores_gemma":[0.999171,0.0001638526,0.0001264746,0.0002033848,0.000223856,0.0001114215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.009246456,0.0002380589,0.03190931,0.0003462784,0.0005898661,0.00007022569,0.003763334,0.000001645059,0.9158258,0.01485198,0.0006086116,0.02254839],"study_design_scores_gemma":[0.007352009,0.005472376,0.3203423,0.0002713438,0.0003960213,0.0001582641,0.002022242,0.0013832,0.2709134,0.3828676,0.007942365,0.0008788672],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959508,0.0008477865,0.000590722,0.0001621667,0.0003364102,0.0004032693,0.0001294828,0.00003393896,0.001545447],"genre_scores_gemma":[0.9894143,0.0002815498,0.008127296,0.0001882752,0.0004493962,0.00003275323,0.001294273,0.00001622749,0.0001959373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6449124,"threshold_uncertainty_score":0.8414103,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07029464086743478,"score_gpt":0.3363488461562785,"score_spread":0.2660542052888437,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}