{"id":"W2118053361","doi":"10.1111/age.12333","title":"Association of <i><scp>TLR</scp>4</i> polymorphisms with <i>Mycobacterium avium</i> subspecies <i>paratuberculosis</i> infection status in Canadian Holsteins","year":2015,"lang":"en","type":"article","venue":"Animal Genetics","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; University of Guelph","funders":"","keywords":"Mycobacterium avium subspecies paratuberculosis; Biology; Paratuberculosis; Single-nucleotide polymorphism; SNP; Haplotype; Genetics; Subspecies; Immunology; Mycobacterium; Gene; Genotype; Zoology; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002726091,0.0003247026,0.0002283614,0.0008070021,0.0009035346,0.0004055222,0.000431832,0.0004387588,0.001446562],"category_scores_gemma":[0.0005202154,0.0001561114,0.0003962232,0.0009046031,0.0004987034,0.00007883969,0.0002038229,0.0003940095,0.00009726203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001985214,"about_ca_system_score_gemma":0.001695093,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5735272,"about_ca_topic_score_gemma":0.6526794,"domain_scores_codex":[0.9996746,0.00003003207,0.00001988423,0.00008326934,0.00008821969,0.0001040523],"domain_scores_gemma":[0.9996172,0.00007701272,0.0001251125,0.00001956477,0.00006139438,0.00009965996],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009410773,0.0000953789,0.970657,0.00003116117,0.000211525,0.0005345975,0.0004593358,0.0002681128,0.02074734,0.0001088413,0.0002973024,0.005648303],"study_design_scores_gemma":[0.000008595683,0.00005582385,0.9987409,0.000006265054,0.00005825275,0.0001536432,0.0001277879,0.0002420781,0.00038181,0.00001545956,0.0002048622,0.00000466858],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994882,0.00007984877,0.00004493353,0.00002469545,0.00000170463,0.000002453778,0.0001634681,0.00000194454,0.0001927256],"genre_scores_gemma":[0.9993382,0.00005603175,0.0001413797,0.00001839331,0.000002552181,0.000002250988,0.0001746888,0.000001921355,0.0002645946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4264728,"threshold_uncertainty_score":0.8579687,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02056241980022857,"score_gpt":0.2595496638257618,"score_spread":0.2389872440255333,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}