{"id":"W2118177226","doi":"10.1128/mbio.01355-14","title":"Epidemic Klebsiella pneumoniae ST258 Is a Hybrid Strain","year":2014,"lang":"en","type":"article","venue":"mBio","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":216,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Klebsiella pneumoniae; Clade; Multilocus sequence typing; Genome; Strain (injury); Whole genome sequencing; Gene; Biology; Microbiology; Genetics; Escherichia coli; Phylogenetics; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002458513,0.0001586116,0.0001633627,0.00002230454,0.00005638372,0.00002968538,0.0002503101,0.0001103492,0.0001162825],"category_scores_gemma":[0.0001169682,0.0001536557,0.00009288427,0.00004154424,0.00009496263,0.000002438014,0.00008137156,0.00008378899,0.0001592017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001210739,"about_ca_system_score_gemma":0.00003392843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001099883,"about_ca_topic_score_gemma":0.00001009616,"domain_scores_codex":[0.9989375,0.00006862755,0.0002082557,0.0003843957,0.0001007511,0.0003004556],"domain_scores_gemma":[0.9992557,0.00001667998,0.00008135589,0.0005212959,0.00003786934,0.00008716539],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002563386,0.00002952108,0.01480372,0.00002038531,0.00003150061,0.000003713806,0.0000218624,0.000002321054,0.9560507,0.0002011885,0.02385396,0.004955529],"study_design_scores_gemma":[0.0006416554,0.0003151539,0.04018173,0.00004082649,0.00002665865,0.00004896986,0.00004728632,0.0002195655,0.4684069,0.00110795,0.4884232,0.0005400683],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898866,0.0001643641,0.003087085,0.0006127628,0.0002280865,0.0001076143,0.00005877272,0.00002233041,0.005832379],"genre_scores_gemma":[0.9936364,0.00007805346,0.0008097211,0.001218502,0.0003293447,0.000003049716,0.00008594988,0.00002782989,0.003811191],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4876437,"threshold_uncertainty_score":0.6265898,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007903885138946907,"score_gpt":0.2401786447591925,"score_spread":0.2322747596202456,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}