{"id":"W2118271207","doi":"10.1093/molbev/msu197","title":"Reduced Representation Genome Sequencing Suggests Low Diversity on the Sex Chromosomes of Tonkean Macaque Monkeys","year":2014,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Animal Behavior and Reproduction","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Autosome; Population; Y chromosome; Macaque; Genetics; Evolutionary biology; X chromosome; Sex ratio; Rhesus macaque; Genome; Effective population size; Genetic variation; Gene; Ecology; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001408536,0.00007494641,0.00009599381,0.00001146801,0.0002976403,0.000005791754,0.00008433474,0.0001006246,0.00002588555],"category_scores_gemma":[0.00005386981,0.0000287241,0.00004571846,0.0001123148,0.0001292237,0.00003327936,0.00008088123,0.00007906451,0.000004684176],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002968044,"about_ca_system_score_gemma":0.000003268828,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004781099,"about_ca_topic_score_gemma":0.00003341683,"domain_scores_codex":[0.999293,0.000175754,0.000101307,0.0002479157,0.00006568489,0.0001163481],"domain_scores_gemma":[0.9997579,0.00004239245,0.00007012469,0.00006572168,0.00003725497,0.00002659247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002015798,0.00001515746,0.03422063,0.000002324576,0.000006035414,5.193104e-7,0.00005300675,0.00001647954,0.9612144,0.002253283,0.000007182653,0.002190802],"study_design_scores_gemma":[0.00007612858,0.0003439145,0.7222585,0.000008819003,0.00001851238,0.000008298223,0.0002196352,0.0001029784,0.2743169,0.002490629,0.00005726765,0.00009843671],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985582,0.0000378309,0.0001517038,0.0007995373,0.00006206988,0.0001269023,0.000006246411,0.00002147096,0.0002360389],"genre_scores_gemma":[0.9997234,0.00002049941,0.00001746264,0.00005445848,0.00008033364,0.000004163816,0.00004399469,5.452563e-7,0.00005516329],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6880379,"threshold_uncertainty_score":0.2289239,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01911272174058712,"score_gpt":0.2396573865157102,"score_spread":0.2205446647751231,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}