{"id":"W2118310643","doi":"10.1111/j.1469-8137.2011.03948.x","title":"The transcriptome of the arbuscular mycorrhizal fungus <i>Glomus intraradices</i> (DAOM 197198) reveals functional tradeoffs in an obligate symbiont","year":2011,"lang":"en","type":"article","venue":"New Phytologist","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":361,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"College of Engineering, Michigan State University; Institut National de la Recherche Agronomique; European Commission; Deutsche Forschungsgemeinschaft; Oak Ridge National Laboratory; Michigan State University; U.S. Department of Energy; National Science Foundation","keywords":"Obligate; Biology; Fungus; Glomeromycota; Symbiosis; Transcriptome; Glomus; Arbuscular mycorrhizal; Botany; Arbuscular mycorrhizal fungi; Mycorrhiza; Spore; Gene; Genetics; Bacteria; Gene expression; Inoculation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003504812,0.0001996451,0.000239736,0.0000181557,0.00031021,0.00004836164,0.0006383495,0.000147806,0.001101269],"category_scores_gemma":[0.0001009039,0.00006402878,0.0002076564,0.0004633115,0.00007390843,0.000216384,0.0000290576,0.000346123,0.00006722754],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002695507,"about_ca_system_score_gemma":0.00002903422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004607807,"about_ca_topic_score_gemma":0.003416155,"domain_scores_codex":[0.9983209,0.0002481964,0.0004525858,0.0003287913,0.0002729365,0.000376547],"domain_scores_gemma":[0.9986156,0.0008330534,0.000175395,0.0001816995,0.00006722615,0.0001270349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001365411,0.0008224915,0.619337,0.00002425832,0.0001005573,0.00004171953,0.001395595,0.00004495929,0.2953188,0.03119019,0.02522208,0.02513698],"study_design_scores_gemma":[0.0002386496,0.000580258,0.8615788,0.0001058056,0.00006261417,0.000155883,0.0008520195,0.00007872455,0.007865449,0.01062624,0.1174881,0.0003674583],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870615,0.001829378,0.00001693635,0.002093554,0.001200499,0.0003688166,0.0004224865,0.00005321317,0.006953643],"genre_scores_gemma":[0.9977491,0.0006573414,0.00007365035,0.0006670018,0.0003050422,0.00002214186,0.0001492808,0.000001983576,0.0003744432],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2874533,"threshold_uncertainty_score":0.9998119,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03316058126869011,"score_gpt":0.2115102058999719,"score_spread":0.1783496246312818,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}