{"id":"W2118510150","doi":"10.1128/aem.70.1.452-458.2004","title":"Phylogenetic Analysis of the Hypervariable Region of the 18S rRNA Gene of<i>Cryptosporidium</i>Oocysts in Feces of Canada Geese (<i>Branta canadensis</i>): Evidence for Five Novel Genotypes","year":2004,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Oklahoma State University; U.S. Environmental Protection Agency","keywords":"Biology; Cryptosporidium; Phylogenetic tree; Hypervariable region; 18S ribosomal RNA; Genetic diversity; Genotype; Phylogenetics; Ribosomal RNA; Branta; Genetics; Goose; Zoology; Feces; Gene; Ecology; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001097309,0.0001283097,0.0004157862,0.00006387266,0.00008047229,7.817106e-7,0.0001971725,0.0001465757,0.00001336796],"category_scores_gemma":[0.00003634445,0.0000881482,0.00009662742,0.000204883,0.0005956248,0.0000112609,0.0001029609,0.00008926001,2.347746e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008084905,"about_ca_system_score_gemma":0.000190187,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.104175,"about_ca_topic_score_gemma":0.0798294,"domain_scores_codex":[0.9991441,0.00004379151,0.000382567,0.0002026533,0.00002258308,0.0002042529],"domain_scores_gemma":[0.9991136,0.0002919925,0.0002981946,0.0002700468,0.00001413215,0.00001199595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007740834,0.0001071444,0.04248477,0.00002849806,0.0003413081,2.770195e-7,0.0001697891,0.004203061,0.9520922,0.0003957786,0.00004142515,0.00005834748],"study_design_scores_gemma":[0.0007567139,0.00006297814,0.2365368,0.00003355143,0.0004222246,0.00002784345,0.0001937799,0.000004545175,0.761626,0.0000763255,0.0001736977,0.00008554787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997236,0.001535623,0.0001134016,0.00006400552,0.0001462228,0.0003181576,0.0005547091,0.000001115511,0.00003083578],"genre_scores_gemma":[0.9994309,0.000245008,0.0001221873,0.00009427708,0.000005382802,0.00001519688,0.00005019433,0.00000616695,0.00003071729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.194052,"threshold_uncertainty_score":0.9369613,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00875237786013299,"score_gpt":0.1900889098663806,"score_spread":0.1813365320062476,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}