{"id":"W2118527670","doi":"10.1093/database/bar026","title":"International Cancer Genome Consortium Data Portal--a one-stop shop for cancer genomics data","year":2011,"lang":"en","type":"article","venue":"Database","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":672,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Computer science; Genome; Genomics; Interface (matter); Genome browser; Software; Computational biology; World Wide Web; Biology; Gene; Genetics; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01131519,0.001196456,0.002586964,0.01079643,0.001166721,0.00745831,0.004872494,0.002107072,0.09701239],"category_scores_gemma":[0.02856002,0.001542238,0.0009938002,0.0241879,0.0005985969,0.007305696,0.008665226,0.004052174,0.06245559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001868818,"about_ca_system_score_gemma":0.006417294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006380338,"about_ca_topic_score_gemma":0.006680167,"domain_scores_codex":[0.9953271,0.001297409,0.0007132005,0.0006288419,0.001720337,0.0003131214],"domain_scores_gemma":[0.9686621,0.008133035,0.001577163,0.009335243,0.004512797,0.007779618],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002929321,0.00008682019,0.002297121,0.0005799409,0.00007635456,0.0001850543,0.0001572508,0.0003982061,0.0007129794,0.006451477,0.9079117,0.08085021],"study_design_scores_gemma":[0.0002860852,0.00004753621,0.00264479,0.0002363675,0.00003140945,0.0002806578,0.0001614232,0.001388491,0.001083239,0.007075644,0.9866892,0.00007531064],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"software","genre_scores_codex":[0.002547126,0.002355534,0.0697664,0.009777087,0.001044517,0.001575081,0.7274562,0.1294801,0.05599803],"genre_scores_gemma":[0.01157586,0.001792161,0.08738171,0.00215351,0.0003887214,0.001299326,0.8705602,0.01344186,0.01140675],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.09701239,"threshold_uncertainty_score":0.3245388,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1220212605109674,"score_gpt":0.3372931504936901,"score_spread":0.2152718899827227,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}