{"id":"W2119090297","doi":"10.1093/nar/gkv584","title":"A<i>cis</i>-encoded sRNA, Hfq and mRNA secondary structure act independently to suppress IS<i>200</i>transposition","year":2015,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transposase; Genetics; Transfer RNA; RNA; Transposition (logic); Open reading frame; Transposable element; Gene; Genome; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001992295,0.0005145435,0.0003600986,0.0001842576,0.0001592297,0.0004531891,0.0002353559,0.0003552648,0.001200479],"category_scores_gemma":[0.0002148005,0.0001883219,0.0004220399,0.00009787925,0.0004173096,0.0001942602,0.000259542,0.0004776412,0.0007358487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003470299,"about_ca_system_score_gemma":0.0002899891,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004172295,"about_ca_topic_score_gemma":0.000706943,"domain_scores_codex":[0.9997317,0.00004423882,0.00001935135,0.00007060025,0.0000871766,0.0000469694],"domain_scores_gemma":[0.9997045,0.00006451155,0.00007986766,0.00005093258,0.00004285085,0.0000572776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001955362,0.000004303849,0.0001388022,0.000009354644,0.000001973056,0.000019011,0.00000436453,0.00002237251,0.9992374,0.00007525214,0.000009214895,0.0004583303],"study_design_scores_gemma":[0.000003810087,0.0001373918,0.002803497,0.000002799118,0.000006102656,0.000130885,0.00001930507,0.0005501127,0.9954072,0.00005873489,0.0008765536,0.000003682495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9771696,0.001172404,0.01698381,0.0001619423,0.0000661346,0.0000401153,0.0002040019,0.0003350451,0.00386702],"genre_scores_gemma":[0.992081,0.0001851642,0.004590353,0.0001188648,0.00001457962,0.00001993881,0.0003637872,0.0000653872,0.002561091],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001200479,"threshold_uncertainty_score":0.004015982,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02467963444390468,"score_gpt":0.3043421194953194,"score_spread":0.2796624850514147,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}