{"id":"W2119135386","doi":"10.1074/mcp.m112.021048","title":"Proteomic Characterization of Phagosomal Membrane Microdomains During Phagolysosome Biogenesis and Evolution","year":2012,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Institute for Research in Immunology and Cancer; McGill University and Génome Québec Innovation Centre; Université Laval; Université de Montréal; Western University; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research","keywords":"Phagolysosome; Biogenesis; Characterization (materials science); Cell biology; Chemistry; Lipid microdomain; Membrane; Biology; Nanotechnology; Materials science; Phagosome; Intracellular; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002621039,0.0002860713,0.0002653516,0.0001427195,0.0001118757,0.00001996967,0.0001538354,0.0002804151,0.00001585727],"category_scores_gemma":[0.00001798984,0.0003158798,0.0001602703,0.0001772142,0.0001246676,0.00002594102,0.00008580821,0.00010527,0.000005884452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003605971,"about_ca_system_score_gemma":0.00005095616,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002414332,"about_ca_topic_score_gemma":0.0000014761,"domain_scores_codex":[0.9984593,0.0001015014,0.0004010176,0.0004036731,0.0002038662,0.000430659],"domain_scores_gemma":[0.9991418,0.000001690052,0.0002189784,0.0003959327,0.0000852649,0.000156326],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001804335,0.0001281542,0.02006123,0.0001717427,0.00007511467,0.000005564751,0.0001051208,0.00001025507,0.9790327,0.0001462447,2.374993e-7,0.0000831836],"study_design_scores_gemma":[0.0009017685,0.00009882146,0.03023011,0.00002553375,0.00008151119,0.00004005054,0.00001475961,0.00005689581,0.9679475,0.00001389304,0.0002652892,0.0003238938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9294832,0.0006382421,0.06872512,0.00002725877,0.0001202887,0.0008935094,0.00004984374,0.00002362365,0.00003885932],"genre_scores_gemma":[0.9949544,0.0001998668,0.002029923,0.00002308618,0.0002130469,0.00007315844,0.002358562,0.00006720918,0.00008071874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0666952,"threshold_uncertainty_score":0.9999293,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004494203822038473,"score_gpt":0.1853914214417526,"score_spread":0.1808972176197141,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}