{"id":"W2119315789","doi":"10.1128/jb.01493-12","title":"Roles of AtpI and Two YidC-Type Proteins from Alkaliphilic Bacillus pseudofirmus OF4 in ATP Synthase Assembly and Nonfermentative Growth","year":2012,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"ATP Synthase and ATPases Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Petroleum Technology Research Centre","keywords":"ATP synthase; Biology; Bacillus subtilis; Glutamine amidotransferase; ATPase; Biochemistry; Mutant; Escherichia coli; Biophysics; Enzyme; Bacteria; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003776489,0.0001509854,0.0003759573,0.0001140552,0.00003313065,0.00001194313,0.0001282957,0.0001490055,0.00003930307],"category_scores_gemma":[0.0002084257,0.0001235555,0.00006045072,0.00007261108,0.0002145975,0.00002568092,0.000153456,0.0001823232,0.000001553361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001793704,"about_ca_system_score_gemma":0.00009502834,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001229018,"about_ca_topic_score_gemma":0.00006542545,"domain_scores_codex":[0.9987869,0.0002389102,0.000404086,0.0001759594,0.0001117332,0.0002824301],"domain_scores_gemma":[0.9992055,0.00007886934,0.000275874,0.0001313962,0.0001453123,0.0001630398],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006128203,0.0001311883,0.06681566,0.00002188169,0.00009832023,0.00002303942,0.0003439614,9.516161e-7,0.928755,0.0000273533,0.00003519147,0.003134576],"study_design_scores_gemma":[0.002990571,0.002601386,0.2194797,0.0001139448,0.00006668969,0.0002459202,0.000728377,0.00003135497,0.77113,0.0001661987,0.00216329,0.0002826113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996404,0.002910163,0.0001139053,0.0002286926,0.00009646764,0.0001376098,0.00003842466,0.00000150694,0.00006925284],"genre_scores_gemma":[0.9976158,0.001297513,0.0006562209,0.00008832355,0.0002806766,0.000004698052,0.00002192945,0.00001523016,0.00001957259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1576251,"threshold_uncertainty_score":0.5038446,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01822127415043387,"score_gpt":0.3038491986439145,"score_spread":0.2856279244934806,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}