{"id":"W2119436534","doi":"10.1186/1756-0500-2-39","title":"Recent developments in StemBase: a tool to study gene expression in human and murine stem cells","year":2009,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Stem Cell Network; Genome Canada","keywords":"Stem cell; Gene expression; Gene; Biology; Microarray analysis techniques; Gene expression profiling; Computational biology; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009689364,0.00236262,0.002219148,0.00991316,0.001284,0.004577068,0.004317325,0.00186684,0.01826159],"category_scores_gemma":[0.01421421,0.001847868,0.001507382,0.01042492,0.001147359,0.004694812,0.003339728,0.003402106,0.01785731],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001067404,"about_ca_system_score_gemma":0.002714966,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003059265,"about_ca_topic_score_gemma":0.00407615,"domain_scores_codex":[0.9961841,0.0006780713,0.0007257888,0.0006911472,0.001593893,0.000126985],"domain_scores_gemma":[0.9875615,0.005341377,0.001052262,0.002098861,0.002410155,0.001535994],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001872355,0.0005804189,0.005885525,0.006057544,0.0005768527,0.001057318,0.002065289,0.004114254,0.07318319,0.01519102,0.4079575,0.4814588],"study_design_scores_gemma":[0.0002601125,0.0002147474,0.006282688,0.000601062,0.000340897,0.001021314,0.0001745181,0.005544889,0.0296419,0.009598592,0.946099,0.0002202489],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.01756454,0.01225799,0.4372247,0.004046301,0.001686194,0.001413064,0.2328091,0.271769,0.02122915],"genre_scores_gemma":[0.01473204,0.008917918,0.5004695,0.001525552,0.0005403506,0.002215517,0.4335471,0.0272936,0.01075838],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.01826159,"threshold_uncertainty_score":0.06109107,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09687790010801615,"score_gpt":0.3913400636805162,"score_spread":0.2944621635725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}