{"id":"W2119501580","doi":"10.1186/1471-2164-9-223","title":"A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers","year":2008,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":164,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; University of Victoria","funders":"Norges Forskningsråd; Genome Canada","keywords":"Biology; Salmo; Genetics; Linkage disequilibrium; Microsatellite; Genetic linkage; Single-nucleotide polymorphism; SNP; Population; Genome; Linkage (software); Tag SNP; Evolutionary biology; Gene; Allele; Genotype; Fish <Actinopterygii>; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003179753,0.0005233986,0.0002577202,0.002020813,0.0004934624,0.0004092168,0.0002935922,0.0003131083,0.003772513],"category_scores_gemma":[0.0005466181,0.0002472826,0.0005440198,0.001477426,0.0001696662,0.0001971187,0.0005046168,0.0004853834,0.001716678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003698732,"about_ca_system_score_gemma":0.0009486236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006064678,"about_ca_topic_score_gemma":0.008011036,"domain_scores_codex":[0.9998457,0.00001634229,0.00001023077,0.00006943214,0.00004131496,0.000016817],"domain_scores_gemma":[0.9995731,0.0001059161,0.0001054866,0.00001988416,0.0001426268,0.00005303565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001252052,0.0004055872,0.07007393,0.001089077,0.0004006513,0.001765137,0.0009558165,0.005603114,0.6643097,0.002433358,0.003762194,0.2479494],"study_design_scores_gemma":[0.0003444059,0.001422679,0.8261313,0.0004232566,0.0008835004,0.002746448,0.0006894227,0.01843055,0.06585246,0.005303162,0.07761391,0.0001588914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.892187,0.002763683,0.0809594,0.0004238125,0.0000655132,0.0002878836,0.01154938,0.0008137266,0.01094963],"genre_scores_gemma":[0.8251982,0.001661823,0.1329055,0.0001502385,0.00005926375,0.0003671123,0.0304006,0.0001232009,0.009134098],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006064678,"threshold_uncertainty_score":0.01262039,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01753134667296372,"score_gpt":0.2157169602427539,"score_spread":0.1981856135697902,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}