{"id":"W2119709358","doi":"10.1101/gr.7076308","title":"Genome structure and emerging evidence of an incipient sex chromosome in <i>Populus</i>","year":2008,"lang":"en","type":"article","venue":"Genome Research","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":191,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Oak Ridge National Laboratory; Biological and Environmental Research; Program for New Century Excellent Talents in University; Office of Science; UT-Battelle; Genome Canada; Battelle; Laboratory Directed Research and Development; U.S. Department of Energy; National Science Foundation","keywords":"Heterogametic sex; Biology; Genetics; Locus (genetics); Genome; Haplotype; Chromosome; Microsatellite; Chromosome regions; Evolutionary biology; Genotype; Allele; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009941943,0.0001702618,0.0001213426,0.0005319093,0.0001480048,0.0002800964,0.0002131991,0.0003073862,0.0006006623],"category_scores_gemma":[0.0002323725,0.00007882044,0.000120247,0.0004190469,0.0002788752,0.0001383692,0.0001570535,0.0002885506,0.000152825],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001347736,"about_ca_system_score_gemma":0.0001147853,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004632935,"about_ca_topic_score_gemma":0.0006344467,"domain_scores_codex":[0.9999263,0.000007800436,0.000006345612,0.00002887179,0.00002112666,0.00000960664],"domain_scores_gemma":[0.9997644,0.000039298,0.0001191749,0.00001765631,0.00002300705,0.00003651777],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001975586,0.0000149809,0.01145465,0.0001312463,0.00003097243,0.001070195,0.0001120656,0.0001429938,0.975686,0.0005588089,0.0001041903,0.01049638],"study_design_scores_gemma":[0.00003716118,0.0004473658,0.7896745,0.00005537982,0.0002370647,0.01187986,0.0003247907,0.0009344976,0.1741684,0.002353949,0.01985698,0.00003010889],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916774,0.003421614,0.002252786,0.0002619622,0.0000105293,0.000008098014,0.000787881,0.00005225402,0.00152751],"genre_scores_gemma":[0.9940731,0.001657804,0.002083072,0.0001089091,0.00002512044,0.000007010086,0.0014943,0.0000107947,0.0005398566],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006006623,"threshold_uncertainty_score":0.002009451,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04955541276611611,"score_gpt":0.3504918871291868,"score_spread":0.3009364743630707,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}