{"id":"W2119886845","doi":"10.1186/1471-2105-5-13","title":"SeeGH – A software tool for visualization of whole genome array comparative genomic hybridization data","year":2004,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Genome browser; Computer science; Context (archaeology); Genome; Visualization; Chromosome; DNA microarray; Reference genome; Human genome; Comparative genomic hybridization; Software; Genome project; Copy number analysis; Annotation; Computational biology; Biology; Genetics; Data mining; Genomics; Copy-number variation; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002963202,0.002587268,0.001600768,0.004683543,0.0007525693,0.001805233,0.002986471,0.001425508,0.09156621],"category_scores_gemma":[0.005822107,0.001560412,0.001520629,0.002219522,0.0005934383,0.002256988,0.00252196,0.002634685,0.03522946],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006981113,"about_ca_system_score_gemma":0.001089759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001773641,"about_ca_topic_score_gemma":0.001721221,"domain_scores_codex":[0.9981186,0.0003640052,0.000216476,0.0003380731,0.0008020424,0.000160748],"domain_scores_gemma":[0.9966606,0.001796807,0.0002474562,0.0003467572,0.0007610319,0.0001873338],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001348421,0.0002078654,0.00231214,0.002581478,0.0003047321,0.00132069,0.0009202218,0.004787034,0.07504307,0.006506208,0.5966796,0.3079886],"study_design_scores_gemma":[0.0008163016,0.000320721,0.008652905,0.0006260517,0.0001903643,0.002750384,0.0002820241,0.0882576,0.1324315,0.02320273,0.7418787,0.000590633],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002624429,0.0004266155,0.4849775,0.0002895597,0.0002936381,0.0003746282,0.02183191,0.4851885,0.003993222],"genre_scores_gemma":[0.02626291,0.0009242321,0.7832634,0.001039872,0.0002051415,0.003232382,0.07309039,0.09609008,0.01589154],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.09156621,"threshold_uncertainty_score":0.3063195,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03524230117997183,"score_gpt":0.278305355110992,"score_spread":0.2430630539310202,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}