{"id":"W2120056890","doi":"10.1073/pnas.1113893109","title":"Identification of innate immunity elicitors using molecular signatures of natural selection","year":2012,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Elicitor; Innate immune system; Biology; Immune system; Callose; Virulence; Pattern recognition receptor; Arabidopsis thaliana; Pathogen; Genetics; Microbiology; Gene; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001003832,0.00006527879,0.0001191955,0.00005874267,0.0001752628,0.00001098581,0.000457642,0.00006957856,0.00001176306],"category_scores_gemma":[0.0003197889,0.00002661236,0.00008078121,0.0009294755,0.0003259327,0.0005613133,0.00008286838,0.0001687374,2.051566e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002243808,"about_ca_system_score_gemma":0.000007275965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001225595,"about_ca_topic_score_gemma":4.254951e-7,"domain_scores_codex":[0.9989477,0.00001930661,0.0003564691,0.00008757084,0.0004771867,0.0001118071],"domain_scores_gemma":[0.9987648,0.0001059589,0.0007297538,0.000004042189,0.0003789554,0.00001646617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001108784,0.00006566864,0.006304301,0.00001664467,0.00001058455,2.657962e-10,0.00006927775,0.00005491939,0.990986,0.001994949,0.0000276269,0.0004589599],"study_design_scores_gemma":[0.00002203243,0.00002081578,0.2411737,0.00003719415,0.000008190065,0.000003229731,0.0001790188,0.0005288068,0.7570238,0.0009447477,0.00002276176,0.00003576437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992283,0.0002205596,4.905329e-7,0.0001789381,0.00004655703,0.0000863895,0.00002341102,0.000004594861,0.0002107434],"genre_scores_gemma":[0.999752,0.00001542833,0.0001483718,0.0000260272,0.00004088138,0.000001313938,6.239678e-7,3.999301e-7,0.00001489539],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2348694,"threshold_uncertainty_score":0.1347997,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03195018561718159,"score_gpt":0.2871002591643711,"score_spread":0.2551500735471895,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}