{"id":"W2120621084","doi":"10.1093/molbev/msi104","title":"Evolution of RAG-1 in Polyploid Clawed Frogs","year":2005,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":93,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Subfunctionalization; Genetics; Gene; Most recent common ancestor; Polyploid; Evolutionary biology; Phylogenetic tree; Ploidy; Genome; Gene family","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003542934,0.0001961785,0.0002271295,0.001099805,0.0004674956,0.0004411516,0.0004206755,0.0006567398,0.0009989748],"category_scores_gemma":[0.0005810825,0.00023423,0.00033443,0.0003793969,0.0005240553,0.0004753325,0.0004449019,0.000401271,0.0002641011],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006682373,"about_ca_system_score_gemma":0.0001712667,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008547034,"about_ca_topic_score_gemma":0.001241907,"domain_scores_codex":[0.9998381,0.00002850674,0.00001227695,0.00007380587,0.0000252801,0.00002197769],"domain_scores_gemma":[0.9996532,0.00006806699,0.0001626546,0.00003559067,0.00002295919,0.00005742167],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001942427,0.00004175036,0.08771557,0.0001079793,0.00005703127,0.0006158396,0.000410577,0.003227432,0.8950538,0.001243874,0.00002742179,0.01130457],"study_design_scores_gemma":[0.00005255057,0.0007100291,0.9244419,0.00006738304,0.0001234101,0.005638384,0.0005896866,0.01215219,0.05042645,0.001423572,0.004292008,0.00008239833],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990373,0.0001744016,0.0004520096,0.00001874255,8.687096e-7,0.000003767634,0.00003224684,0.00001303424,0.0002677675],"genre_scores_gemma":[0.9980156,0.0001570924,0.001367061,0.00001876677,0.000002876583,0.000006548669,0.00008388358,0.000008424487,0.000339706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001099805,"threshold_uncertainty_score":0.00484848,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005698562075753869,"score_gpt":0.2161844753489776,"score_spread":0.2104859132732238,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}