{"id":"W2120692714","doi":"10.1371/journal.pgen.1000608","title":"Tissue Effect on Genetic Control of Transcript Isoform Variation","year":2009,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; McGill University and Génome Québec Innovation Centre; McGill University","funders":"Uppsala Universitet; Akademiska Sjukhuset; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Erasmus Medisch Centrum; European Commission; ZonMw; Canadian Institutes of Health Research; Genome Canada","keywords":"Biology; Gene isoform; Genome-wide association study; Genetics; Genetic variation; Gene; Single-nucleotide polymorphism; Transcriptome; Genetic association; Phenotype; Gene expression; Computational biology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007899409,0.0002813047,0.0003336332,0.0006981858,0.0002112324,0.0004226279,0.000195115,0.0002751253,0.002414704],"category_scores_gemma":[0.0009457316,0.0001861358,0.0004531218,0.0005278161,0.0003261185,0.0001191891,0.0003347075,0.0002844038,0.0003704781],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001052405,"about_ca_system_score_gemma":0.0001219434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000890426,"about_ca_topic_score_gemma":0.001898449,"domain_scores_codex":[0.9990133,0.000303786,0.00008984385,0.0003344375,0.0001897534,0.00006893167],"domain_scores_gemma":[0.9989864,0.0005228429,0.0001922536,0.0001704808,0.00007635367,0.00005170484],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006361174,0.00002451491,0.1045652,0.0000883071,0.0002550435,0.0004836576,0.000113766,0.0002114821,0.8878524,0.0002559753,0.0001067604,0.005406771],"study_design_scores_gemma":[0.00002790095,0.0002711433,0.9334217,0.00001727672,0.0002521012,0.001705213,0.00008552497,0.0009793206,0.06098595,0.0004418381,0.001797958,0.0000139891],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9879181,0.00149891,0.007453399,0.0001111721,0.00004065961,0.0000266695,0.001491611,0.00006922695,0.00139026],"genre_scores_gemma":[0.9953822,0.0003325749,0.002547911,0.00009857643,0.00001457701,0.00002925918,0.0009620328,0.00004469371,0.000588103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002414704,"threshold_uncertainty_score":0.008077979,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007864351589389668,"score_gpt":0.2418892025376692,"score_spread":0.2340248509482795,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}