{"id":"W2120943202","doi":"10.1186/1471-2164-12-31","title":"Regulation and expression of sexual differentiation factors in embryonic and extragonadal tissues of Atlantic salmon","year":2011,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Reproductive biology and impacts on aquatic species","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Genome British Columbia; Genome Canada","keywords":"Biology; Sexual differentiation; SOX9; Genetics; Gonad; Doublesex; Embryonic stem cell; RNA splicing; Transcription factor; Disorders of sex development; Alternative splicing; Regulation of gene expression; Gene; Cell biology; Messenger RNA; Endocrinology; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007799787,0.00006430479,0.0001059162,0.00003421209,0.00001297612,0.000001934155,0.00003359783,0.00008273245,0.000007198621],"category_scores_gemma":[0.00005885472,0.00005399671,0.000009385399,0.00001880485,0.00008460809,0.000004431724,0.00003613904,0.00002206071,1.020044e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004709257,"about_ca_system_score_gemma":0.00001817915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008010813,"about_ca_topic_score_gemma":0.0001219498,"domain_scores_codex":[0.9995739,0.00003942793,0.0001369386,0.0001567066,0.00002960593,0.00006345254],"domain_scores_gemma":[0.9997311,0.0000108125,0.0001008185,0.0001194822,0.00002002485,0.00001775061],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009013878,0.00001946183,0.3191532,0.00002235821,0.000004185756,3.085284e-8,0.0003516819,0.000002239,0.6801428,0.00003958526,0.000005120173,0.0001692878],"study_design_scores_gemma":[0.0001238524,0.0001380894,0.5272325,0.000004335593,0.000004910204,9.131526e-7,0.0001804486,0.00001677864,0.4721653,0.00008366922,0.00001707081,0.00003209155],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988443,0.0005561208,0.0004258551,0.000003536575,0.00003195789,0.00009010564,0.000004053229,0.000001370652,0.00004266883],"genre_scores_gemma":[0.9990432,0.0001363762,0.000695607,0.000001448288,0.00002036368,0.000001084963,0.00003601876,0.000004744084,0.00006118976],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2080794,"threshold_uncertainty_score":0.2201922,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02938845051851463,"score_gpt":0.2434827235741761,"score_spread":0.2140942730556615,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}