{"id":"W2121210416","doi":"10.1371/journal.pone.0008072","title":"Systems-Level Comparison of Host-Responses Elicited by Avian H5N1 and Seasonal H1N1 Influenza Viruses in Primary Human Macrophages","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Public Health Service; National Institutes of Health; University of Hong Kong; University Grants Committee","keywords":"Influenza A virus subtype H5N1; Biology; Influenza A virus; Interferon; Virus; Virology; Immunology; Tumor necrosis factor alpha; Pathogenesis; Cytokine; Viral shedding; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003922872,0.0002684662,0.001001944,0.0003644781,0.0001353154,0.00003746695,0.0001527862,0.0001333809,0.00002865507],"category_scores_gemma":[0.0005967851,0.0002438556,0.00005229147,0.0003570538,0.0002706138,0.0001400697,0.0001104724,0.0004105774,0.00001752947],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001679135,"about_ca_system_score_gemma":0.00009905051,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003193099,"about_ca_topic_score_gemma":0.00002506976,"domain_scores_codex":[0.9973497,0.00020072,0.0006570679,0.0003515755,0.0009587305,0.000482159],"domain_scores_gemma":[0.998704,0.0003088584,0.0001735949,0.0003297159,0.0002977012,0.0001861946],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001161901,0.002048506,0.471951,0.0006779025,0.0002613162,0.00002750947,0.0006208491,0.000001663863,0.5220171,0.00003486595,0.0007302164,0.0004671612],"study_design_scores_gemma":[0.003099864,0.0010875,0.8805859,0.001257406,0.0001340967,0.000003853136,0.0003374528,0.0001148042,0.1128406,0.00001054596,0.000308554,0.0002194762],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9831163,0.01475602,0.00000325693,0.0002491833,0.00001021737,0.0008418603,0.0002422687,0.00006846242,0.0007124362],"genre_scores_gemma":[0.9974689,0.0001973775,0.0004141192,0.001306876,0.00006556066,0.00004530915,0.00002357902,0.00002805249,0.0004502341],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4091766,"threshold_uncertainty_score":0.9944141,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2129884899327808,"score_gpt":0.3990446769843649,"score_spread":0.186056187051584,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}