{"id":"W2121278089","doi":"10.1093/dnares/dsp028","title":"Genome-Wide Screening of Genes Whose Enhanced Expression Affects Glycogen Accumulation in Escherichia coli","year":2010,"lang":"en","type":"article","venue":"DNA Research","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; European Regional Development Fund; Keio University","keywords":"Biology; Glycogen; Gene; Escherichia coli; Phenotype; Gene expression; Plasmid; Genome; Glycogen synthase; Genetics; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003335849,0.0004588637,0.0006296329,0.0006905493,0.0001984378,0.0004262948,0.0002514779,0.0003295307,0.0005831712],"category_scores_gemma":[0.0003887746,0.0002016486,0.0003940798,0.0008030946,0.0002179729,0.000111393,0.0003225626,0.0003976746,0.0003302928],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002582712,"about_ca_system_score_gemma":0.0003495109,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000800672,"about_ca_topic_score_gemma":0.001467779,"domain_scores_codex":[0.9998037,0.00004010555,0.00002252743,0.00004410425,0.00005458872,0.00003497738],"domain_scores_gemma":[0.9997653,0.00009697784,0.0000366644,0.00002436269,0.00003100857,0.00004558274],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009869418,0.00002398072,0.0006938284,0.00004713304,0.00001085197,0.00007400106,0.00001193903,0.0001237698,0.9975593,0.00002011451,0.00002680544,0.001309611],"study_design_scores_gemma":[0.00005421086,0.0006214355,0.06072667,0.00002244856,0.0002089211,0.001024716,0.0001372383,0.002000464,0.9318526,0.0001033961,0.003216372,0.00003144968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9889773,0.0009429058,0.004921069,0.0001475281,0.00001266588,0.00009170037,0.004087992,0.0001283075,0.0006906639],"genre_scores_gemma":[0.9718599,0.001464687,0.01266603,0.0002310965,0.00001383257,0.0001146728,0.01177598,0.00007450242,0.001799374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000800672,"threshold_uncertainty_score":0.00195092,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03856990748022368,"score_gpt":0.3422126283332029,"score_spread":0.3036427208529792,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}