{"id":"W2121564154","doi":"10.1086/507313","title":"Immunogenetics of CD4 Lymphocyte Count Recovery during Antiretroviral Therapy: An AIDS Clinical Trials Group Study","year":2006,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; University of California, San Diego; University of North Carolina at Chapel Hill; U.S. Public Health Service; University of California, Los Angeles; Bavarian Nordic; Ohio State University; Rush University; Georgetown University; University of Cincinnati; University of Pittsburgh; University of Washington; Case Western Reserve University; Massachusetts General Hospital; University of Minnesota; Harvard University; University of Rochester; University of Miami; Northwestern University; York University; Bristol-Myers Squibb; University of Pennsylvania; Gilead Sciences; Vanderbilt University; ACT Government; University of Southern California; GlaxoSmithKline; Emory University; Abbott Laboratories","keywords":"Immunology; Multifactor dimensionality reduction; Lymphocyte; Viremia; Biology; Viral load; Tumor necrosis factor alpha; Immune system; Genotype; Single-nucleotide polymorphism; Gene; Oncology; Medicine; Antibody; Genetics; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00282292,0.0001795527,0.000668866,0.0001782318,0.0002328594,0.00002993643,0.0002304752,0.0001219991,0.0003741093],"category_scores_gemma":[0.0004175498,0.0001128844,0.0004690806,0.0001375192,0.000175137,0.0002476907,0.00003873841,0.0003115138,0.00002480966],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009744406,"about_ca_system_score_gemma":0.0001184464,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003427811,"about_ca_topic_score_gemma":0.00001734749,"domain_scores_codex":[0.9947273,0.003272782,0.001597262,0.0001200815,0.00009651489,0.0001860169],"domain_scores_gemma":[0.9971534,0.0007403127,0.001503164,0.0003052074,0.0002729602,0.00002494083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01670741,0.006580041,0.4798369,0.0000189404,0.001815573,0.00001133516,0.0002743017,0.0004111746,0.4748178,0.00002562113,0.001469727,0.01803118],"study_design_scores_gemma":[0.01724748,0.0249559,0.9051615,0.00008272289,0.001089752,0.0005503719,0.001951568,0.000006120621,0.04604148,0.0001734108,0.002444538,0.0002951633],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985071,0.009656391,0.0001037593,0.000008028227,0.004735656,0.0002683746,0.000010112,0.00002660094,0.0001200732],"genre_scores_gemma":[0.9963478,0.002847258,0.000003231041,0.00005747278,0.0003117326,0.000003139124,0.0000155243,0.0000196085,0.0003941751],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4287763,"threshold_uncertainty_score":0.4603294,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02943175907156601,"score_gpt":0.3212346931412839,"score_spread":0.2918029340697179,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}