{"id":"W2121726710","doi":"10.1111/j.1558-5646.2007.00149.x","title":"NUCLEAR LOCI AND COALESCENT METHODS SUPPORT ANCIENT HYBRIDIZATION AS CAUSE OF MITOCHONDRIAL PARAPHYLY BETWEEN GADWALL AND FALCATED DUCK (<i>ANAS</i>SPP.)","year":2007,"lang":"en","type":"article","venue":"Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service; Delta Waterfowl; University of Maryland, Baltimore County; National Science Foundation","keywords":"Paraphyly; Biology; Introgression; Coalescent theory; Mitochondrial DNA; Evolutionary biology; Monophyly; Genetics; Lineage (genetic); Phylogenetics; Clade; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002205722,0.0001026197,0.0001209813,0.00006089262,0.00008555262,0.00001224278,0.00005523532,0.0001456231,0.00002334335],"category_scores_gemma":[0.00005144153,0.0001091279,0.00003645897,0.00009399319,0.00009807268,0.000006557842,0.00006699074,0.00005401182,0.000002958007],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001623628,"about_ca_system_score_gemma":0.000030748,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008562181,"about_ca_topic_score_gemma":0.00003018326,"domain_scores_codex":[0.9992212,0.000066694,0.0001939014,0.0002432087,0.0001221365,0.0001528767],"domain_scores_gemma":[0.9995396,0.000009089855,0.0001154017,0.0001402344,0.0001007769,0.00009497264],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002485116,0.00004176537,0.1558611,0.00004549674,0.00009824806,0.000002845587,0.0004188192,0.00007918216,0.8346851,0.0005096698,0.004157539,0.003851703],"study_design_scores_gemma":[0.0008980988,0.0003114953,0.8555297,0.000008720556,0.00009413742,0.00002129124,0.0001913891,0.00005164117,0.1197711,0.0001805573,0.02275177,0.0001901078],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9775295,0.0003153412,0.02160308,0.00004859357,0.0001531655,0.0001610519,0.00002963703,0.000009095455,0.0001504953],"genre_scores_gemma":[0.9934847,0.00006919001,0.005870868,0.00007358554,0.0001309343,5.392991e-7,0.0002496166,0.000008579599,0.0001119228],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.714914,"threshold_uncertainty_score":0.4450107,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01305895467631621,"score_gpt":0.2837598308985169,"score_spread":0.2707008762222006,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}