{"id":"W2121731147","doi":"10.1128/iai.72.7.4200-4209.2004","title":"<i>Mycobacterium bovis</i>BCG Urease Attenuates Major Histocompatibility Complex Class II Trafficking to the Macrophage Cell Surface","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Vancouver Coastal Health","funders":"Canadian Institutes of Health Research; Genentech; Michael Smith Health Research BC; British Columbia Lung Association","keywords":"Intracellular; Biology; Microbiology; Mycobacterium bovis; Mycobacterium smegmatis; Intracellular parasite; Interferon gamma; Urease; Molecular biology; Biochemistry; Mycobacterium tuberculosis; Enzyme; In vitro; Tuberculosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009092232,0.0001795338,0.0003264294,0.00006747328,0.0006966135,0.00003234831,0.0000950735,0.0001032485,0.0002140173],"category_scores_gemma":[0.000380404,0.0001147233,0.0001085949,0.0002456691,0.0001765986,0.00008951383,0.0001576571,0.0005827461,0.0001249555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002184932,"about_ca_system_score_gemma":0.00007891874,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008916028,"about_ca_topic_score_gemma":0.001104275,"domain_scores_codex":[0.9984835,0.0004128301,0.0003063125,0.0002641862,0.0001522405,0.0003808768],"domain_scores_gemma":[0.9988626,0.0001638731,0.0000701145,0.0004678113,0.0001379836,0.0002976285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001557759,0.002460251,0.2847154,0.0004634235,0.0002052417,0.00003572321,0.003241038,0.00212381,0.6628702,0.0001428031,0.02982825,0.0123561],"study_design_scores_gemma":[0.001813275,0.0008901394,0.8961174,0.00003760405,0.00005055121,0.0001029989,0.0001136572,0.0003955936,0.007165128,0.00005848822,0.09308922,0.0001659661],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9869266,0.00017024,0.0003131833,0.0101724,0.0001755852,0.0006890004,0.00002264153,0.00009089632,0.001439432],"genre_scores_gemma":[0.9960995,0.0001293907,0.0002278798,0.00306448,0.0001010768,0.00002235864,0.00005674476,0.00001541511,0.0002830993],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6557051,"threshold_uncertainty_score":0.9976837,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03137382373798894,"score_gpt":0.3108248376016366,"score_spread":0.2794510138636477,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}