{"id":"W2121850323","doi":"10.1038/sj.onc.1208892","title":"NRG1 gene rearrangements in clinical breast cancer: identification of an adjacent novel amplicon associated with poor prognosis","year":2005,"lang":"en","type":"article","venue":"Oncogene","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"ca_institutions":"Hospital for Sick Children; University of British Columbia; BC Cancer Agency; Vancouver General Hospital","funders":"","keywords":"Amplicon; Biology; Carcinogenesis; Fluorescence in situ hybridization; Locus (genetics); Gene duplication; Estrogen receptor; Comparative genomic hybridization; Breast cancer; Genetics; Gene; Cancer research; Molecular biology; Cancer; Chromosome; Polymerase chain reaction","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001394784,0.0001511515,0.0004176978,0.0001578136,0.00003568097,0.00001809227,0.0001865744,0.0001479976,0.0002342691],"category_scores_gemma":[0.000135508,0.0001313518,0.00007001621,0.0005308844,0.000116485,0.000111292,0.00004635915,0.0002586093,0.0000219199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006660725,"about_ca_system_score_gemma":0.0004988461,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008953561,"about_ca_topic_score_gemma":0.002507345,"domain_scores_codex":[0.9975172,0.0001244444,0.0007871945,0.000464533,0.0007364474,0.0003701724],"domain_scores_gemma":[0.9986539,0.00005026222,0.0002843281,0.0003827155,0.0003971579,0.0002316527],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008731497,0.003451821,0.4332792,0.00007678311,0.0002111613,0.00001683202,0.0001672828,0.00007722708,0.370604,0.000006073619,0.0005670381,0.1906694],"study_design_scores_gemma":[0.005338091,0.0005954949,0.8835709,0.0003960524,0.0001200156,0.00002249023,0.00005894333,0.001849585,0.1062311,0.000002320651,0.001646888,0.000168094],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952909,0.0002626092,0.0000706936,0.00280631,0.00008755043,0.0009399408,0.0002543608,0.00003780003,0.0002498148],"genre_scores_gemma":[0.9972184,0.0004020804,0.001013567,0.0002778584,0.0003087329,0.0002170699,0.0001443914,0.00004486691,0.0003729964],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4502917,"threshold_uncertainty_score":0.5356372,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09046705075895692,"score_gpt":0.4284531646079335,"score_spread":0.3379861138489766,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}