{"id":"W2121855760","doi":"10.1093/molbev/msp138","title":"The Chloroplast Genomes of the Green Algae Pedinomonas minor, Parachlorella kessleri, and Oocystis solitaria Reveal a Shared Ancestry between the Pedinomonadales and Chlorellales","year":2009,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Chloroplast; Algae; Botany; Green algae; Genome; Evolutionary biology; Ecology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003126803,0.0001504625,0.0001833624,0.00001472809,0.0008296586,0.00001203601,0.0002883962,0.0001907842,0.0000228967],"category_scores_gemma":[0.00003736943,0.00008418924,0.00004045417,0.00008675254,0.001792925,0.00004257311,0.0003227884,0.0002522821,0.000003122995],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002292219,"about_ca_system_score_gemma":0.00001435376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006921762,"about_ca_topic_score_gemma":0.0008430349,"domain_scores_codex":[0.9989524,0.0003063673,0.0001962003,0.0002409496,0.00005138428,0.0002527038],"domain_scores_gemma":[0.9993518,0.0002047046,0.0001271512,0.0002610059,0.00001046461,0.00004487272],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001602671,0.00003259795,0.8601068,0.00001541035,0.00005918252,0.000002204187,0.0007813175,0.00002082007,0.1270905,0.003410867,0.0005442196,0.007775782],"study_design_scores_gemma":[0.0001939644,0.0001877207,0.979718,0.000006706394,0.00004234299,0.0000347337,0.00009452493,0.00006310741,0.0006582131,0.01736741,0.001526971,0.000106303],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931388,0.003949187,0.00006847488,0.00220671,0.00006387052,0.0002462786,0.00002898153,0.000007460794,0.0002902635],"genre_scores_gemma":[0.9991308,0.0004513351,0.00005398335,0.0002043334,0.00004690031,0.000009218094,0.0000219689,0.000004357082,0.00007705962],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1264323,"threshold_uncertainty_score":0.6606106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01013526997034087,"score_gpt":0.236984742356062,"score_spread":0.2268494723857211,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}