{"id":"W2122052416","doi":"10.1128/genomea.00568-13","title":"Complete Genome Sequence of Persistent Cystic Fibrosis Isolate Pseudomonas aeruginosa Strain RP73","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Cystic fibrosis; Pseudomonas aeruginosa; Strain (injury); Biology; Whole genome sequencing; Lung infection; Microbiology; Chronic infection; Lung; Genome; Persistence (discontinuity); Airway; Genetics; Bacteria; Gene; Medicine; Internal medicine; Anatomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001469642,0.0002502201,0.0002641962,0.00005353035,0.0001264343,0.00005802679,0.0002667536,0.0001295446,0.0002364121],"category_scores_gemma":[0.00001705549,0.0002436804,0.0002188817,0.0001097322,0.0001408584,0.00001416837,0.0001838264,0.00007812229,0.0001294379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003971232,"about_ca_system_score_gemma":0.00006328405,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001609559,"about_ca_topic_score_gemma":0.000006140253,"domain_scores_codex":[0.9984037,0.00005975607,0.0004014921,0.000451929,0.0002037534,0.000479327],"domain_scores_gemma":[0.9990287,0.000006603025,0.0001888515,0.0004507434,0.000189068,0.0001359691],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004384597,0.00004973975,0.0002204774,0.00004155777,0.000150452,0.000002319935,0.0001025187,0.0001109934,0.998664,0.00001159849,0.0001039102,0.0004985756],"study_design_scores_gemma":[0.006563934,0.007892732,0.07408572,0.0003007925,0.0005881034,0.0002382593,0.00186105,0.001242042,0.134078,0.0002125059,0.7687768,0.004159989],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959213,0.0005546828,0.0001449073,0.000141368,0.0002519951,0.0004229603,0.001776852,0.00001342228,0.0007725114],"genre_scores_gemma":[0.9943622,0.000127603,0.002004804,0.0003471224,0.0001774892,0.0000177233,0.002186266,0.00002600387,0.0007508303],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.864586,"threshold_uncertainty_score":0.9937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02197457224671177,"score_gpt":0.2323937584853298,"score_spread":0.2104191862386181,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}